| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3864 |
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| Symbol | |
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| ID | 6118213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4709552 |
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| End bp | 4710472 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635426 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001762217 |
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| Protein GI | 170728191 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.163001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAAAAAC ACTCCATCAT CCCTAAAGCG ATCACTGAGT ACGATCTACG TCTACTACGT
ATCTTTCGTA CTGTGGTTGA GAACGGTGGC TTCGCTGCAT CTGAAACAGA GCTTGGTGTC
ACTCGCTCCA CTATTAGCGT GCATATGTCC AACCTTGAGA GCCGGATGAA ACTCAAACTT
TGTAGCCGAG GACGTGGAGG CTTTGCACTA ACCGAAGATG GCCAGGCGGT TTATCACGCC
TGTATTGAGC TATTTGACTC ACTAAATGAC TTTTCCATGT TGGTGAGCAG TTTAGGAGAG
GAGTTAAGTG GTGAGTTAAC GCTACTTTGC GCCGATCAAC TCGATAATAC CATGCAGAAA
AAACTGGCCG AAGTGATCCG CTATTTGCAT CAAAAAGAGC CTCAACTGCA CCTGATATTA
GATGGGGATT CCATTCATAA TATTGAACGT GCACTGTTGC AGGATAAAGC ACACCTTGGG
CTCCTCCCCA GTTACCACCA GATTGAAGGA CTTAATTACC ACACCATCTA CAGCGAGCCT
ATCTATCTCT GTTGCAGTGA GCACCACCCC TACTTTGAGT TGGAAGACGG TGAGATCACC
CCAGAGATGT TAGCTCAATC CCCCTCTATT CACCCCGGTA TCGACATAGA TAGCGACGGT
CGTGAGCAGC TTAAAAAACT CAACTTATCT GCCAAGGCAT ACCAGTTTGA TACTAGAAAA
ACCTTAATTC TATCGGGCTG CTACATAGGT TATCTGCCCG AGAGCTACAT CCAAAACGAG
CTAACAACGA AGCAGATGCG GATAATCCAC AGTGATAGTG CGCGCTACCA ATTTAACCTC
TCCATGGTAT TTAAGAAAAA CCCAAGAGAG ACTCACAAGG TAGAGCTGTT AAAAACCGCT
TTCCATAAAG TGTTTGGTTA G
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| Protein sequence | MKKHSIIPKA ITEYDLRLLR IFRTVVENGG FAASETELGV TRSTISVHMS NLESRMKLKL
CSRGRGGFAL TEDGQAVYHA CIELFDSLND FSMLVSSLGE ELSGELTLLC ADQLDNTMQK
KLAEVIRYLH QKEPQLHLIL DGDSIHNIER ALLQDKAHLG LLPSYHQIEG LNYHTIYSEP
IYLCCSEHHP YFELEDGEIT PEMLAQSPSI HPGIDIDSDG REQLKKLNLS AKAYQFDTRK
TLILSGCYIG YLPESYIQNE LTTKQMRIIH SDSARYQFNL SMVFKKNPRE THKVELLKTA
FHKVFG
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