| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3863 |
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| Symbol | |
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| ID | 6118212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4707949 |
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| End bp | 4709406 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641635425 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_001762216 |
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| Protein GI | 170728190 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.310813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCAG TTAACGACAC AGGATTAGTG AAGCTCAGTT CCTATATCGA TGGGAGCTGG
AGTGATGGTG AGCAGAAGTT TGATGTGACC AACCCTGCCA ATGGTAAGGT GATTGCTCAG
GTGCACAATG CTGGCGTGGA TGAAACTGAG TTAGCGGTTA TTGCGGCTAA ACGAGCATTG
CCAACTTGGT CGAAAAAGTC AGCTAATGAG CGCTCTGCTA TTTTGAGAAC CTGGTTTAAT
TTGATGATGG CAGCGCAAGA TGATCTTGGT CGTATCTTAA CGTTAGAACA GGGCAAGCCG
CTTGCAGAAG CGAAAGGTGA GATAGCCTAT GGCGCTGCAT TTATCGAATG GTTTGCCGAA
GAGGGCAAGC GAGTTTATGG CGATACTATT CCTGCGCCCT CGGGTGATAA GCGCATTGTT
GTTATCAAGC AGCCTGTTGG TGTGGTCGCC TCTATTACGC CTTGGAACTT CCCCAATGCG
ATGATCGCCC GAAAAGCTGC GGCTGCGCTG GCAGCTGGCT GCACTTTTGT AGTTCGTCCC
TCTCCTTCAA CGCCGCTTTC GGCACTGGCA ATGGCTGAGC TTGCTGAGCG TGCGGGTGTG
CCTGCTGGCG TATTTAATGT GGTTGTAGGT GAAGACTCTG TTGGTATGGG CAAGGTGTTA
ACTCAACATC CTGATGTGGC TAAGTTTACC TTCACTGGTT CAACAGCTGT GGGCAAGATT
TTGATGACGC AAACGGCGAC AACGGTGAAG AAAGTCTCCA TGGAGCTGGG TGGCAATGCG
CCATTTATCG TGTTCGACGA TGCCGATCTA GATGCCGCGG TTCAGGGAGC TTTGATCTCT
AAGTACCGTA ATGCGGGTCA AACCTGTGTT TGTACTAACC GAATTTTAGT GCAAAAAGGG
GTGGCTAAAG CCTTTACCGA CAAGTTTGTT ACAGCGGTCG AAGCTCTTAA GATGGGAGAT
GGCTTGGAAG CTGGCGTAAA TGTGGGCCCG ATGATCTCAT CTGAGGCCGT AGCGGGAGTG
CAGGCATTGG TTGATAAAAC AGTGGAGCAG GGTGGCGTCG TCATTAAAGG TGGCAAACAA
AGCAGTGATG CTGGCAGCTT TTATGAGCCA ACTATCGTGG CTAATGTGAC CAATGATATG
GCGCTGGCAA GCAATGAGAT TTTTGGTCCT GTGACGCCGA TTATTACCTT CGATACCGAA
GCTGAGGCGA TTGAGATAGC CAATGATACT GAATATGGGT TAGCGGCTTA TTTTTATTCG
CGAGATATTG GCCGAGTTTG GCGCGTGGGC GAAGGGCTCG AATATGGCAT GGTGGGAGTG
AATGAAGGAA TCATCTCCAA TGCTGCCGCT CCTTTTGGTG GTGTTAAACA GTCTGGTAAT
GGCCGTGAAG GCTCTAAATA TGGTTTAGAT GATTACCTAG AGATTAAGTA TTTGTGCATG
GGCGGCATCG ACCGTTAA
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| Protein sequence | MQAVNDTGLV KLSSYIDGSW SDGEQKFDVT NPANGKVIAQ VHNAGVDETE LAVIAAKRAL
PTWSKKSANE RSAILRTWFN LMMAAQDDLG RILTLEQGKP LAEAKGEIAY GAAFIEWFAE
EGKRVYGDTI PAPSGDKRIV VIKQPVGVVA SITPWNFPNA MIARKAAAAL AAGCTFVVRP
SPSTPLSALA MAELAERAGV PAGVFNVVVG EDSVGMGKVL TQHPDVAKFT FTGSTAVGKI
LMTQTATTVK KVSMELGGNA PFIVFDDADL DAAVQGALIS KYRNAGQTCV CTNRILVQKG
VAKAFTDKFV TAVEALKMGD GLEAGVNVGP MISSEAVAGV QALVDKTVEQ GGVVIKGGKQ
SSDAGSFYEP TIVANVTNDM ALASNEIFGP VTPIITFDTE AEAIEIANDT EYGLAAYFYS
RDIGRVWRVG EGLEYGMVGV NEGIISNAAA PFGGVKQSGN GREGSKYGLD DYLEIKYLCM
GGIDR
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