Gene Swoo_3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3852 
Symbol 
ID6118201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4696866 
End bp4698239 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content43% 
IMG OID641635414 
Producthypothetical protein 
Protein accessionYP_001762205 
Protein GI170728179 
COG category[S] Function unknown 
COG ID[COG3014] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.506454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTAC GTTCTCTTTC TATTGTTATT GCTGTAACTA TGCTATCAGG CTGTGCTGGT 
TTAATGCATG GTCAAGATAC TGAAAAATTT AATACCTATA TGTCAGCTGG TGACTTTGCT
GGTGCCTCTC AATTTGCTTT AGAAAAGTCG GGTTATAACC CGGAAGAGAA GACAGTAGAT
GATCTGCTGT GGGCTATCGA AGCAGGTGCA ACTTTGAGTT ATGCAGGTCA GTTTGAAAAA
TCTATTAGCT TACTAGATGC TTCAGAAAGC ATGATGAAGA AAGAAGATCA GGAAAGCTTA
GTTAATGATG CCTCAGAAGT TGGCCTATCC ATGTTAGGTA ACGATGCCAT GATGGCTTAT
GAGCAAACCC AGTATGATGG CGTGATGGCC AATAGCATTA AGGCTTGGAG CTTTGCATTT
AATAATGAGC ATGGTGATGC CAGAGTTGAG TGGAACCGAG CCGAAGAGCG CCAAAGACGT
GCTGCTGAGT ACTTCGCTAA GCAGATTAAA GAGCAAAAAG ATGCAGAGGA AGGTGAAGAG
ACCTCTGAGT ATGTTGCTAA GTCAGTACAG AGTGAAGAGA CCAAAAAGCT TCTGGCCAAA
AATGGTGTGA CCTTGGAACA GTGGCAGCCC TATAAAGGTT ATGTAAATCC TTATACTACT
TATAGTTACG GTTTAAACCT ATTGGTTAAC GGTAAGTCTA AGTCTGATTT CCAGAAAGCT
GAAGACGCAT TTAAACGTGT TTATGGTTTG AGTCAGTCTA AGTCGGTCGC TGAAGATATT
AAACTTGCTA CCTCACTTCG CCAAGGTAAG AAAAATGCGG CTGATGGCAT GGTTTGGGTG
ATTTTCGAAA ACGGCCAGTC AGTTGTCAAA GAGGAGTTTC GCATAGACCT GCCTGTGTTC
CTGTTAAGTG ACGATGTCTC TTATACAGGT ATCGCTTTGC CAAGACTGAA AGAGCGTGAG
TTAGCACACA AGCACATTCA GATTGATGGT GTGAAGACTG AAACTATCGC AGATATGGAT
AAAATTATTG GGGCTGAATT TGAAAAGCAG TATCCGATGA TCCTGACTCG TGAAATTACA
CGTACTGTGT TGAAAACGGT CGCTCAGAAG CAGGCTATGG ATTCCAACGA GATCCTTGGC
AACCTGTTAG CCGTTGCTCA AGTGGCTACG ACCAATGCCG ACACCCGTAG TTTTAGCTCT
CTGCCTAAAG AGTTCCAAAC TACCAGACTT AAAAAAAGCG GTAACAGTGT GAAGTTGAAG
GCGGGAACAC ATGAGATTTT GGTTGAGCTA GATACTAATG CAAAGCGTCA TATTGTTTAC
GTTAAAGCTA TCTCTCCGCT AGTCGCTCCT ACTGTTCGCG TGATCAATAT TTAA
 
Protein sequence
MKLRSLSIVI AVTMLSGCAG LMHGQDTEKF NTYMSAGDFA GASQFALEKS GYNPEEKTVD 
DLLWAIEAGA TLSYAGQFEK SISLLDASES MMKKEDQESL VNDASEVGLS MLGNDAMMAY
EQTQYDGVMA NSIKAWSFAF NNEHGDARVE WNRAEERQRR AAEYFAKQIK EQKDAEEGEE
TSEYVAKSVQ SEETKKLLAK NGVTLEQWQP YKGYVNPYTT YSYGLNLLVN GKSKSDFQKA
EDAFKRVYGL SQSKSVAEDI KLATSLRQGK KNAADGMVWV IFENGQSVVK EEFRIDLPVF
LLSDDVSYTG IALPRLKERE LAHKHIQIDG VKTETIADMD KIIGAEFEKQ YPMILTREIT
RTVLKTVAQK QAMDSNEILG NLLAVAQVAT TNADTRSFSS LPKEFQTTRL KKSGNSVKLK
AGTHEILVEL DTNAKRHIVY VKAISPLVAP TVRVINI