Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3852 |
Symbol | |
ID | 6118201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4696866 |
End bp | 4698239 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641635414 |
Product | hypothetical protein |
Protein accession | YP_001762205 |
Protein GI | 170728179 |
COG category | [S] Function unknown |
COG ID | [COG3014] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.506454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAATTAC GTTCTCTTTC TATTGTTATT GCTGTAACTA TGCTATCAGG CTGTGCTGGT TTAATGCATG GTCAAGATAC TGAAAAATTT AATACCTATA TGTCAGCTGG TGACTTTGCT GGTGCCTCTC AATTTGCTTT AGAAAAGTCG GGTTATAACC CGGAAGAGAA GACAGTAGAT GATCTGCTGT GGGCTATCGA AGCAGGTGCA ACTTTGAGTT ATGCAGGTCA GTTTGAAAAA TCTATTAGCT TACTAGATGC TTCAGAAAGC ATGATGAAGA AAGAAGATCA GGAAAGCTTA GTTAATGATG CCTCAGAAGT TGGCCTATCC ATGTTAGGTA ACGATGCCAT GATGGCTTAT GAGCAAACCC AGTATGATGG CGTGATGGCC AATAGCATTA AGGCTTGGAG CTTTGCATTT AATAATGAGC ATGGTGATGC CAGAGTTGAG TGGAACCGAG CCGAAGAGCG CCAAAGACGT GCTGCTGAGT ACTTCGCTAA GCAGATTAAA GAGCAAAAAG ATGCAGAGGA AGGTGAAGAG ACCTCTGAGT ATGTTGCTAA GTCAGTACAG AGTGAAGAGA CCAAAAAGCT TCTGGCCAAA AATGGTGTGA CCTTGGAACA GTGGCAGCCC TATAAAGGTT ATGTAAATCC TTATACTACT TATAGTTACG GTTTAAACCT ATTGGTTAAC GGTAAGTCTA AGTCTGATTT CCAGAAAGCT GAAGACGCAT TTAAACGTGT TTATGGTTTG AGTCAGTCTA AGTCGGTCGC TGAAGATATT AAACTTGCTA CCTCACTTCG CCAAGGTAAG AAAAATGCGG CTGATGGCAT GGTTTGGGTG ATTTTCGAAA ACGGCCAGTC AGTTGTCAAA GAGGAGTTTC GCATAGACCT GCCTGTGTTC CTGTTAAGTG ACGATGTCTC TTATACAGGT ATCGCTTTGC CAAGACTGAA AGAGCGTGAG TTAGCACACA AGCACATTCA GATTGATGGT GTGAAGACTG AAACTATCGC AGATATGGAT AAAATTATTG GGGCTGAATT TGAAAAGCAG TATCCGATGA TCCTGACTCG TGAAATTACA CGTACTGTGT TGAAAACGGT CGCTCAGAAG CAGGCTATGG ATTCCAACGA GATCCTTGGC AACCTGTTAG CCGTTGCTCA AGTGGCTACG ACCAATGCCG ACACCCGTAG TTTTAGCTCT CTGCCTAAAG AGTTCCAAAC TACCAGACTT AAAAAAAGCG GTAACAGTGT GAAGTTGAAG GCGGGAACAC ATGAGATTTT GGTTGAGCTA GATACTAATG CAAAGCGTCA TATTGTTTAC GTTAAAGCTA TCTCTCCGCT AGTCGCTCCT ACTGTTCGCG TGATCAATAT TTAA
|
Protein sequence | MKLRSLSIVI AVTMLSGCAG LMHGQDTEKF NTYMSAGDFA GASQFALEKS GYNPEEKTVD DLLWAIEAGA TLSYAGQFEK SISLLDASES MMKKEDQESL VNDASEVGLS MLGNDAMMAY EQTQYDGVMA NSIKAWSFAF NNEHGDARVE WNRAEERQRR AAEYFAKQIK EQKDAEEGEE TSEYVAKSVQ SEETKKLLAK NGVTLEQWQP YKGYVNPYTT YSYGLNLLVN GKSKSDFQKA EDAFKRVYGL SQSKSVAEDI KLATSLRQGK KNAADGMVWV IFENGQSVVK EEFRIDLPVF LLSDDVSYTG IALPRLKERE LAHKHIQIDG VKTETIADMD KIIGAEFEKQ YPMILTREIT RTVLKTVAQK QAMDSNEILG NLLAVAQVAT TNADTRSFSS LPKEFQTTRL KKSGNSVKLK AGTHEILVEL DTNAKRHIVY VKAISPLVAP TVRVINI
|
| |