| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3849 |
|---|
| Symbol | |
|---|
| ID | 6118198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4693632 |
|---|
| End bp | 4694759 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641635411 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001762202 |
|---|
| Protein GI | 170728176 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0636697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAAT TTTCAGTTTT GCTGGTCGCC CTGTTTGCAT CATCCTCCGC TTTGGCTGGG
ATCGAATCTA TTGAAGTGAC TGGTACAGGT AAAACATTGC CTTTAGCTAT CGATGCTGCA
CTTGTCAGCG CTGTTGAGCA GGTCTCAGGG GTGACTGTAA GCAGTCAACG TCAGTCATTG
GATAGCTCCT CGAGAAAATC GGGTGAAGGA ACGAGCTTTT TACGCCAACG TACAGGTGAG
ATGAATTTTG GTACCGCAGG TCGTGCGACT TACCGTATCT TGTCTGAAAA CTGTGGGGGT
GAAAAGTGTA AAGTGCGTCT GTTGGCCAAT ATCGAAACCA ACGATGACCT AGAGCGCCAA
AAGAAGCTCA AAGGGATGAA CAAAAACCGT CGAACCATAG CGGTTGAACC GTTTGTCGGC
GCGCACTCGA AAGAGTTCTC TCGTGCCATT GAGGCGCGTT TGGTGCAGGA CAGGAAGTTC
AGGGTTATCT CAGATCGCAA GCAACCTGGT GTCGACTACG TACTCAAAGG ACGAGTGGTA
GAGGCTAGGA CAACAAAAAG AGTCGTAGAC AACTCCCGTA CTGTCGAGCT TACTGGCGAA
CATATTGACG ATGTTCAGGT GTTTTATGAC AGCAAAGTTG TGGTTGAGTA CCAGTTGATT
GATCTGGTTA ATAACCAGAT AAAATGGAGT GCTAAGGTAC CTACGACCTC GGGACGGAAT
AATCTATCCT ATCTGTTAGA ACTCTCCTCT CGTAAGGTGT TTGAACAGTT GAAGGAGAAT
ATCTACCCTA TGCTGTTGAT CGCTGCTGAG GATGGCTCTT TGGTGCTAAA TTCAGGTGGC
AGCACTGTTG AGCTGGGAGA GCGTTTTGAG GTGTTTGCCG CTGGTGAGAA GATCATCGAC
CCTATTACCA AAGAGAGCTT AGGATTTACC GAAAGTAAGA TAGGTATCAT CAAGGTCATT
AAGGTATTAC CAAAAATGGC TTATGTTGAA TTGGTTGAGG GCAGCCGAGA TGCGCTCTAT
GAACTGCCTA TTGTGCGTAA AATGGCTAAG AGTAAGGCTA GTGTCAAAGC TAAGCCAAAA
GCTGCCGAGG CGCCTGTTGT GAAAAAAAGC AGTGGCATTA TCCTATAG
|
|---|
| Protein sequence | MGKFSVLLVA LFASSSALAG IESIEVTGTG KTLPLAIDAA LVSAVEQVSG VTVSSQRQSL
DSSSRKSGEG TSFLRQRTGE MNFGTAGRAT YRILSENCGG EKCKVRLLAN IETNDDLERQ
KKLKGMNKNR RTIAVEPFVG AHSKEFSRAI EARLVQDRKF RVISDRKQPG VDYVLKGRVV
EARTTKRVVD NSRTVELTGE HIDDVQVFYD SKVVVEYQLI DLVNNQIKWS AKVPTTSGRN
NLSYLLELSS RKVFEQLKEN IYPMLLIAAE DGSLVLNSGG STVELGERFE VFAAGEKIID
PITKESLGFT ESKIGIIKVI KVLPKMAYVE LVEGSRDALY ELPIVRKMAK SKASVKAKPK
AAEAPVVKKS SGIIL
|
|---|
| |