| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3834 |
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| Symbol | |
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| ID | 6118183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4677033 |
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| End bp | 4678097 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635397 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_001762188 |
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| Protein GI | 170728162 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATG TTCATCAACT ACATCCCGGT GCCATCGATG ATGAGCAGCG TTTGGATATC
GCCAGTGATT GGATCGCCAA GATGGATAGG GAGCTGACCG CTGAGGAGCG TGAAGCATTA
GCCCAGTGGC TGCACTGTGA TGTTGAAAAT CTCCATGTTC TGCTCGAAAT CGCCCAGATG
TGGGACAAAA TGGATGAGCT GGGAAGGCTC TCCGATATCT TTCCTAAAGC TAAGCCTACT
CGTAAAAAAA CACCGGTATG GATGGGGGGA ATTGCAGCTT CCATACTGCT TTTTTTGAGT
ATTGGTCTGT ACCAATTTGC TCAAGATGTT GAGCCTAACG CCCAAGTCAC AGGCGTCATT
GCGATGCAAA GCAGTTATCA AACGGCGGTT GGGGAGAGTA ATACCATTAA TCTACCCGAT
GACAGCATTT TGGTTTTGAA TACCAACAGT TTTGTTCAGG TGAAGTACAC GGCAAATGAA
CGAATTATTG AGCTGCAACG TGGTGAGATA AATATTGAAG TTGCCCACGA TAAATCTCGT
CCGTTAAGCG TGCTTGCGGG TGGCAAGGTT ATCCGAGCGG TAGGAACTGC ATTTAATGTC
GATGTGCGTC CAAGCGGTGT TGAGCTGATT GTGACTGACG GTAAGGTGCT GGTGGTTAAA
AAGAGTGCCG AGGCATTTTT AAAAGAGAGT CATGCCGATC AACCTAAGTT GATGGGCACA
GCACTGGCGG TGGCCAAAGA TGAGCGAGTG ATGCTCAATA ATAGGGAGCC TCTGCCAAGC
GTTGCTTCTA AAGTGGCCCC AGGTGAGATA GCCACTAAAC TCTCATGGCG CACTGGAAAT
TTGATCTTCA GAGGTGAGTC TCTCGAAGAG GCCATGGCTG AAATTAGTCG ATATACCGAC
ATTCATTTTG AACTTGCCGA TGATGAAAAC CTTAAAAAGA TTAAAGTGGC CGGTATGTTT
AAGACGGGTG ACGTGAATGG GCTGCTTAAT ATCCTGGATC AAAACTTTAA TGTTAGCCAT
GAAAAGTTGA GCCGCAATAA TATCAAGCTT AACTATGATG GTTAA
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| Protein sequence | MSNVHQLHPG AIDDEQRLDI ASDWIAKMDR ELTAEEREAL AQWLHCDVEN LHVLLEIAQM
WDKMDELGRL SDIFPKAKPT RKKTPVWMGG IAASILLFLS IGLYQFAQDV EPNAQVTGVI
AMQSSYQTAV GESNTINLPD DSILVLNTNS FVQVKYTANE RIIELQRGEI NIEVAHDKSR
PLSVLAGGKV IRAVGTAFNV DVRPSGVELI VTDGKVLVVK KSAEAFLKES HADQPKLMGT
ALAVAKDERV MLNNREPLPS VASKVAPGEI ATKLSWRTGN LIFRGESLEE AMAEISRYTD
IHFELADDEN LKKIKVAGMF KTGDVNGLLN ILDQNFNVSH EKLSRNNIKL NYDG
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