| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3831 |
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| Symbol | |
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| ID | 6118180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4673485 |
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| End bp | 4675503 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641635394 |
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| Product | hypothetical protein |
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| Protein accession | YP_001762185 |
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| Protein GI | 170728159 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAACTA TAATAAGATT AAGCGTTATA TTTTTTGTAC TATTCTCGTC TGTGATTCAA
GCAAAGCAGA TTAAGTCTGG GGAGTATGAA ATCACCCTAG GAGAGCCCAG TGATTGGGTT
GTCACTCAAG CTTTATCACC GCAAAAAATC AATAAAGAGA AAGCTCCTGT TCATTACAGA
CTTGTAGGTC GACAAGACAG GTTTACTGAT AAGAGTAATG AGTATTACCA AGATTTTGCT
GCCACAGCAC TGAATCAGGA AGGGGTAAAA GAGCTCTCTA AAATTGAGCT AACCTTTAAT
CCTGAATTTG AAAAGCTTAC TTTGCACACT GTAGAGATCG AGCGCAGGGA TATTTGGTCC
GACAGGTTAA AAACCGCCAG AATTAATGTT ATTAATCAAG AGCAGGAGCT AAGTAATGAC
CTATTTAATG GCCTAGCGAC CGCTGTTATT GTTTTAAAAG ATGTCAGGGT AGGGGACACG
ATCCGCTATC AGTACAGTAT TAAGGGCCGC AATCCCGTTT ATGGTAAAGA GTTCGGTAGT
AGCTATGCAA TGGGCTGGGA AGTTGCGATA GATAAAGTTC ATGTCAGGTT TATTAACGCA
AGCGGTCAGC CACTCAATAT TCAAAGTAAT GATAATCCTC CTGCGACAAT TACGCAGAGT
CGATTTGGCA AAGAGTATGA ATGGCAACTT GCTAATGTGG CTAAATATAA CTTCGAAGAG
GGGGTTCCTG CTGGCTATTT ATGGTCTCCG ACCGTTTTTG TTAGTAGCAC TCCTTCATGG
TCAGAAGTCA GCAATTGGGC CATTTCTCAC TATCAATTTG ATGAGTCTCC CTCTCGGTCA
TTGAATGAGT ATATTAAAGA GGTCACCACA AACTACTTGA GCAAAGAGGA GCAAGTGGCT
GAGATGATTC GTTTTGTCCA ACAAGATATA CGTTATTTTG GTATTGAGAT TGGTCAGAAT
AGTCATATCC CCCACAGCCC CAATACTGTT TTTGAACGTC GTTATGGTGA CTGTAAAGAT
AAAGCCAGTC TGCTTATTGC CCTGTTAGGA GCAATTGATG TACCTAGCTC GCCGGTTTTA
GTGAACACTG GGATTGGGTT AACTCTCAAT GATCGTGCTC CCTCTGCCAT CTTATTTAAT
CATGTGATTA ATGAGGTTAA CTTTGATGGG AAGCGATACT TTATTGATGC GACCAATAAC
TATCAGGCTA AAGGCCTTGA TTTCATTACT CAGCCAGACT TTGGTTATGG GTTGGTGCTA
GATAAAGGAA CAGATTCATT GGTTGCCATG CCTTCGGGGA ATACTGGGCT AGACAGAGTT
TCAGTAGAGC AACTTTATGT TTCATCCAGT TATACAGAGC CTGTCGATCT TTATATTACG
ACTCGATATT TAGGTCATGA AGCTGATTAT ATGCGTTACC GGTTATCCAG TGTTTCGCTG
TCTGAAATTG AGCAGCACTA TTTAAACTAT TACGCTAAGT TTTATCGAGA TATTAAGCTT
GAGTCACCCG CTTTATTGAT CGACACAACT GAGGGCGGTA ATGAGATATT GATAACGGAG
CATTATCGTA TTGGTGATTT TTGGCTAAAC AATAGCAATG CTATGGATTT TGGGCTATTC
GCTAGTTATA TCAAAAACTA TGTAGAGTTG CCTAAAGTGA TTAATCGGAC CCAGCCGTTA
TCACTGCCGA GTATTGTGTC AATTAATCAG ACGCTGAAGC TTATTATGCC CGATGGCGTT
GATTATCAAG TCAGAGATAC GGATAAAAAT ATCACTAGTA ATGGCGTTAA ATACCATGTT
TCTGAAGCTT ATTATAATGG GCAGTTTGTT CAGCGTCACC AGTTTGAGAT CGATAGGAGA
GTGTTGAATA CAGATGAGAG TCTCGATTAT ATCAACGCCT TAAGAGAGGT TGATAAACAG
CTTTATTATA CAGGTTCTAT CAACGGCGAC TTTTCAGCTC CGGTTAACCC TGGAGTCGAG
TTTATTCTAC AGCAGTCCAT TTCTGTGAAG GAGAAGTAG
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| Protein sequence | MKTIIRLSVI FFVLFSSVIQ AKQIKSGEYE ITLGEPSDWV VTQALSPQKI NKEKAPVHYR
LVGRQDRFTD KSNEYYQDFA ATALNQEGVK ELSKIELTFN PEFEKLTLHT VEIERRDIWS
DRLKTARINV INQEQELSND LFNGLATAVI VLKDVRVGDT IRYQYSIKGR NPVYGKEFGS
SYAMGWEVAI DKVHVRFINA SGQPLNIQSN DNPPATITQS RFGKEYEWQL ANVAKYNFEE
GVPAGYLWSP TVFVSSTPSW SEVSNWAISH YQFDESPSRS LNEYIKEVTT NYLSKEEQVA
EMIRFVQQDI RYFGIEIGQN SHIPHSPNTV FERRYGDCKD KASLLIALLG AIDVPSSPVL
VNTGIGLTLN DRAPSAILFN HVINEVNFDG KRYFIDATNN YQAKGLDFIT QPDFGYGLVL
DKGTDSLVAM PSGNTGLDRV SVEQLYVSSS YTEPVDLYIT TRYLGHEADY MRYRLSSVSL
SEIEQHYLNY YAKFYRDIKL ESPALLIDTT EGGNEILITE HYRIGDFWLN NSNAMDFGLF
ASYIKNYVEL PKVINRTQPL SLPSIVSINQ TLKLIMPDGV DYQVRDTDKN ITSNGVKYHV
SEAYYNGQFV QRHQFEIDRR VLNTDESLDY INALREVDKQ LYYTGSINGD FSAPVNPGVE
FILQQSISVK EK
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