Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3826 |
Symbol | |
ID | 6118175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4664999 |
End bp | 4665769 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641635389 |
Product | hypothetical protein |
Protein accession | YP_001762180 |
Protein GI | 170728154 |
COG category | [S] Function unknown |
COG ID | [COG2968] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAA AAGCCGTTAA ACACATGATT AAATATGATT ATTTTGGAGT TCCTATGAAG CGTTCACTTT TATCAAATCT ACTGACAAGT ACATTTCTCA GCGCAAGCAT CTTGGCCGCT CCACTGCTGC AGGCCAGTGA AATTAGCTTT CCCCATCTTG AAACTGTCGG AGTCAGCAAG CTGGCTGTTG AAGCTGATAT GGCCGAAATT AATGTTCAGG TAGCCATTAA AGATAAAACA GCCAAGGGAG CCAAGACGCT TTCTGATACC GCTGTAGCTA AATTTATCGA GCGTTTAAAA GCGACAGGAG TCGAACGAGC AGATATCCAA AGTGCAAATC TGAATCTTCA GCCTCAATAC CACTACCAAA AAGATAAGCC TGCCGAACTG GTTGGCTACA ACGCAAGCAG GCAGATAACA GTCAAGGTCA GGGAGTTAGC TCGTCTAAAC AATATCTTAG ACTCAGCCCT TGAGGAGGGA ATAAATCGCA TTAACAATAT CGCCCTTAAA ACCAGTAAAG AGGCTGATTA TGTTGAAAAG GCTCGTCAAG CTGCGATTGT TGATGCCAAA AATAAGGCGA GATCCTTAGC TAAAGGCTTT GGTGAAAAGC TAGATGGTGT ATGGGAGATC CGTTATTTCG AGCAACACCC GGTTCAGCCA GTCATGCTAA GAATGAATGC AGCTAGTCCT AAGTTCGATG CCGCTGAGAG TTATCAGCAG GGACAAGTTA CGATCACTGA CAGAGTTGAG GTGGTATTCA AGCTAAAATA A
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Protein sequence | MQAKAVKHMI KYDYFGVPMK RSLLSNLLTS TFLSASILAA PLLQASEISF PHLETVGVSK LAVEADMAEI NVQVAIKDKT AKGAKTLSDT AVAKFIERLK ATGVERADIQ SANLNLQPQY HYQKDKPAEL VGYNASRQIT VKVRELARLN NILDSALEEG INRINNIALK TSKEADYVEK ARQAAIVDAK NKARSLAKGF GEKLDGVWEI RYFEQHPVQP VMLRMNAASP KFDAAESYQQ GQVTITDRVE VVFKLK
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