Gene Swoo_3826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3826 
Symbol 
ID6118175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4664999 
End bp4665769 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content44% 
IMG OID641635389 
Producthypothetical protein 
Protein accessionYP_001762180 
Protein GI170728154 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAA AAGCCGTTAA ACACATGATT AAATATGATT ATTTTGGAGT TCCTATGAAG 
CGTTCACTTT TATCAAATCT ACTGACAAGT ACATTTCTCA GCGCAAGCAT CTTGGCCGCT
CCACTGCTGC AGGCCAGTGA AATTAGCTTT CCCCATCTTG AAACTGTCGG AGTCAGCAAG
CTGGCTGTTG AAGCTGATAT GGCCGAAATT AATGTTCAGG TAGCCATTAA AGATAAAACA
GCCAAGGGAG CCAAGACGCT TTCTGATACC GCTGTAGCTA AATTTATCGA GCGTTTAAAA
GCGACAGGAG TCGAACGAGC AGATATCCAA AGTGCAAATC TGAATCTTCA GCCTCAATAC
CACTACCAAA AAGATAAGCC TGCCGAACTG GTTGGCTACA ACGCAAGCAG GCAGATAACA
GTCAAGGTCA GGGAGTTAGC TCGTCTAAAC AATATCTTAG ACTCAGCCCT TGAGGAGGGA
ATAAATCGCA TTAACAATAT CGCCCTTAAA ACCAGTAAAG AGGCTGATTA TGTTGAAAAG
GCTCGTCAAG CTGCGATTGT TGATGCCAAA AATAAGGCGA GATCCTTAGC TAAAGGCTTT
GGTGAAAAGC TAGATGGTGT ATGGGAGATC CGTTATTTCG AGCAACACCC GGTTCAGCCA
GTCATGCTAA GAATGAATGC AGCTAGTCCT AAGTTCGATG CCGCTGAGAG TTATCAGCAG
GGACAAGTTA CGATCACTGA CAGAGTTGAG GTGGTATTCA AGCTAAAATA A
 
Protein sequence
MQAKAVKHMI KYDYFGVPMK RSLLSNLLTS TFLSASILAA PLLQASEISF PHLETVGVSK 
LAVEADMAEI NVQVAIKDKT AKGAKTLSDT AVAKFIERLK ATGVERADIQ SANLNLQPQY
HYQKDKPAEL VGYNASRQIT VKVRELARLN NILDSALEEG INRINNIALK TSKEADYVEK
ARQAAIVDAK NKARSLAKGF GEKLDGVWEI RYFEQHPVQP VMLRMNAASP KFDAAESYQQ
GQVTITDRVE VVFKLK