| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3820 |
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| Symbol | |
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| ID | 6118169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4656139 |
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| End bp | 4657524 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635383 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_001762174 |
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| Protein GI | 170728148 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGTAC ATATTCTTGG GATCTGTGGC ACCTTTATGG GCGGACTCGC GTTATTAGCA
CGAGCTGAAG GGCACAAGGT TACCGGTAGC GATACCAATG TTTATCCACC GATGAGCACT
CAACTCGAGG AGCAAGGTAT CGAGTTGATT CAAGGATTCG ACCCGTCTCA ACTTGGGGAG
AGTGAAGATG ATGCTCCTGA TTTAGTGGTG ATAGGCAATG CCATGAGTCG CGGCAATACC
TGTGTGGAAG CGGTACTGAA CCGTGGTATT AGTTACACCT CAGGACCACA GTTTTTAGCT
GAGCATATTT TGAAAAACCG CTGGGTGTTA GCTGTATCGG GTACACATGG AAAGACCTCG
ACGTCAAGCA TGTTGGCTTG GATATTAGAA TATTGTGGCT ACGAACCTGG ATTCTTAATT
GGCGGTGTTC CACAAAACTT TGGTGTATCA GCACGTACGG GAAATTCGCC CTTTTTTGTG
GTGGAAGCCG ATGAATATGA CAGTGCCTTT TTTGATAAGC GATCTAAGTT TGTCCATTAT
CAGCCGCGTA CCTTAGTGAT CAATAATCTT GAGTTTGATC ATGCAGATAT TTTCGATGAT
CTCAAAGCAA TTCAACGCCA GTTTAATCAT GTCATACGTA CGGTTCCCGG TGAAGGAAAG
ATCATTTGGC CGAAGGAGAG CCAAGCGGTT ACTGAGGTGA TTAAGATGGG CTGCTGGAGT
GAACAGGAGT TCTATTCAAG CTCAGCAGAT ACTGGCCAAG CGGGTTGGTC GACAAAGTTG
ATTGCCGATG ATGGCCATCA GTTTGAGTTA TTCTTTGATG GAGTGTCTCA AGGAACCTTA
GATTGGCAGC TTATTGGTCA ACACAATGTT GAAAATGCCA CTATGGCAGT AGCCGCTGCA
CGCCATGTTG GGGTAAAACC TCAAGCGGCT ATAGAAGCAC TTGTTAAGTT TCAACCACCA
AAACGCCGAA TGGAGCTGAT TGGTACAGTG AATGGCATAG AGGTTTATGA TGATTTTGCT
CATCACCCTA CTGCGATTGC GACAACCCTA CAGGGCACCC GTGCTAAAGT GGGCGAAGGC
AAGATCACCA TTATTTTAGA GCCTAGATCA AACACCATGA AGAGCGGTGT TCACAAGGAT
ACCTTAGCAG GTTCAATGGC ACTGGCTAAT GAAGCATATC TTTACCAAGC TGATAATATC
GACTGGGATT TAGCTTCGGC GATGAACAAA GCCGAGCTAC CAGTGAAAGT GCTATATGAG
ATAGATGAGA TAGTTGAAAC TGTAGCTGAG AAAGCAGAGT CTGGGGATAC CATTGTAGTG
ATGAGTAACG GTGGCTTTGG TGGCCTGCAT CAGAAGTTAT TGAAGAAGTT AAACGCTAAG
CAGTAA
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| Protein sequence | MHVHILGICG TFMGGLALLA RAEGHKVTGS DTNVYPPMST QLEEQGIELI QGFDPSQLGE
SEDDAPDLVV IGNAMSRGNT CVEAVLNRGI SYTSGPQFLA EHILKNRWVL AVSGTHGKTS
TSSMLAWILE YCGYEPGFLI GGVPQNFGVS ARTGNSPFFV VEADEYDSAF FDKRSKFVHY
QPRTLVINNL EFDHADIFDD LKAIQRQFNH VIRTVPGEGK IIWPKESQAV TEVIKMGCWS
EQEFYSSSAD TGQAGWSTKL IADDGHQFEL FFDGVSQGTL DWQLIGQHNV ENATMAVAAA
RHVGVKPQAA IEALVKFQPP KRRMELIGTV NGIEVYDDFA HHPTAIATTL QGTRAKVGEG
KITIILEPRS NTMKSGVHKD TLAGSMALAN EAYLYQADNI DWDLASAMNK AELPVKVLYE
IDEIVETVAE KAESGDTIVV MSNGGFGGLH QKLLKKLNAK Q
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