Gene Swoo_3818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3818 
Symbol 
ID6118167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4654765 
End bp4655295 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content42% 
IMG OID641635381 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_001762172 
Protein GI170728146 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.76085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACA CGATTGAAGA GATGATCTCT GTTGAAGAGA TTGACCAGAA ACTGGATCTG 
CTAGCTGAGC AGATCAATGC ACATTATGCC GATAGCGAAC GCCTTCTTAT GGTGGGTCTG
CTTAAGGGTT CTGTGGTATT TATGGCGGAT CTTTGTCGTC GTATTAAAGG CCATGTAGAG
ATCGACTTTA TGTCTGTTTC TAGCTACGGC AACGCTATGA CGAGTACTCG TGAAGTAAAA
ATTCTCAAAG ACGTGCAATC TGATATCAAG GGGCGTGACG TTTTAATCGT TGAAGATCTT
ATCGATTCAG GTAACACATT GAATAAGATC CGTGAAATGT TGACTCTGCG TGAACCTAAG
AGTTTGGCAT TGTGTACTCT GCTTGATAAG CCTGAGCGTC GTGAAATCGA TGTGCCAGTC
GATTTTATCG GTTTTACTAT TCCTGATGAG TTTATCGTTG GATATGGTAT CGATTACGCT
GAGCAGTACC GTAACTTGCC CTATATCGCT AAAGTGATCC CATTAGAGTA A
 
Protein sequence
MKHTIEEMIS VEEIDQKLDL LAEQINAHYA DSERLLMVGL LKGSVVFMAD LCRRIKGHVE 
IDFMSVSSYG NAMTSTREVK ILKDVQSDIK GRDVLIVEDL IDSGNTLNKI REMLTLREPK
SLALCTLLDK PERREIDVPV DFIGFTIPDE FIVGYGIDYA EQYRNLPYIA KVIPLE