| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3816 |
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| Symbol | |
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| ID | 6118165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4652908 |
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| End bp | 4653684 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635379 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001762170 |
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| Protein GI | 170728144 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.791577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATGA AAGCCCTCTA TGCCACGGCA TTTAAGAGTA TCTTAACGAA AGAGATCAAC
CGTTTTACTC GGATCTGGGT GCAAACACTA GTGCCGCCAG CAATCAGTAT GACTCTTTAT
TTTCTTATCT TCGGTAACTT AGTGGGTAAG AGGATTGGTG AGATGGGCGG AGTATCCTAT
ATGGAGTTTA TCGCGCCGGG TCTTATTATG ATGTCGGTGA TCACAGCATC TTACTCTAAT
GTGGCCTCCT CATTTTTTAG TGCTAAGTTC CAGCGTAATC TAGAGGAACT TATCGTGGCT
CCTGTGCCCC ATTATGTGAT TATTGCTGGT TACGTAGGTG GTGGCGTGGC TCGCGGATTA
TGTGTTGGTA CCATAGTGAC CTTAGTGGCG CTGTGTTTTG TGGATATCAG CATACAGCAC
GTGGGGCTGG TGGCGATCAC AGTGCTGCTA ACTGCCATTT TGTTTGCGCT GGGGGGCTTG
ATCAATGCAA TTTTTGCCAA GAGTTATGAT GATATCAGTA TCGTACCCAC CTTTGTGTTG
ACCCCTTTAA CCTACTTGGG GGGCGTATTT TATTCGCTCT CTCTGCTACC TGATTTCTGG
CAAGGGGTGT CACAACTCAA TCCTGTGGTT TATATGATCA ATGTATTCCG TTATGGCTTC
TTAGGATATG CAGATATGAG CATACCTCTC TCTATCGCCG TGATGGTGGG GTTTTGCGTT
AGTTTGTGGG CCGTGGCCTA TTACCTAATC AGCCGTGGGA TTGGGTTGAG GAGTTAA
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| Protein sequence | MNMKALYATA FKSILTKEIN RFTRIWVQTL VPPAISMTLY FLIFGNLVGK RIGEMGGVSY
MEFIAPGLIM MSVITASYSN VASSFFSAKF QRNLEELIVA PVPHYVIIAG YVGGGVARGL
CVGTIVTLVA LCFVDISIQH VGLVAITVLL TAILFALGGL INAIFAKSYD DISIVPTFVL
TPLTYLGGVF YSLSLLPDFW QGVSQLNPVV YMINVFRYGF LGYADMSIPL SIAVMVGFCV
SLWAVAYYLI SRGIGLRS
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