| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3808 |
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| Symbol | |
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| ID | 6118157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4648865 |
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| End bp | 4650124 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635371 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001762162 |
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| Protein GI | 170728136 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0541127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGC CAAGTCCATC TAAACAGCTA TTTAGAAAAG AGGTTTTAGA GAGAGGTGAT
AGCAACTCTC TAGGGACCGT TTTTCTAAGA CAGCCTAAAG AATATCAATG GATAGCCATA
TTAATGTTTT TGGTTGTCTC TGGTTTATTG GTTTTTCTCT TTGTTGGAAC TTATACCAAG
TACGCAGATG TATTTGGTGT GATCACCGTC GACAAGGGGC TAGTCAAGGT AAGTGCAAGA
CGGGAAGGAC AGATTATTGA GCAGATGGTA AAGCAGGGGG ATTCCGTCAC TAAAGGCGAC
CTTCTTTATG TTATCTCCAC TGATAGGCAC AGCTCATTTG ATCAGAATTT AGACCAAACG
ATCTTGATTC AGCAGATGGA GCTTCAGTCC TCTTTAGAAC GAGATCTTAA GATTGCTGAG
GAGGCGTCGG GTCTTGAGTT GGCGCTTATT AAAAGCAAAA TCTTATCGAA AACCACAGAG
ATTGAGCAGA TAAATGCGCA GTTAGCGATA TACGATCAAA GGGTGGAGCT TTCTGGGGCG
GGTTTGGCTC GTAATGAAAA GCTGTTAAAA GCAGGTCATA CAAATCAGGC TCAGCTAGAT
AAAGTGATTG AGGATCATCT AGCACTTCAG TCTAAGCGTA ATGATCTGTT AATGAAGCTT
AATTCAACAC AATCTCTGTT AGCAGAGTTA TCAAACGAGT TAGAGCTTAA GCCTGGAATA
TTCAAAGAGA AGCATAATCG CCTCAAACGT AATTTGATTG AAAATAAACA GAGGATCACA
GAGGTCTCAT CCAATATCGA TTACCGGATC TATGCGCCAT TAACTGGGGT GATAGGCAGC
CAACTGACTC ATGTTGGTGA ATTTGTGCGT CCAGGAAACA CTATGGTAAG CCTGATCCCT
GAGGGCTCTA AGCTACAAGC TGAGTTGTAT GTACCCGCAA CCTCGATAGG TTTTATTAAG
CCTGAACAGG AGGTTTCGAT GCGCTATAGC GCTTTCCCCT ACCAGCACTT TGGTCTACAT
AGCGGCAGAG TGCTGAGTGT CTCTAAAGTG ATCTCCCTTC CAGAGGAGTT AGAGACCAGT
GTTGAGCTAA CAGGGGCGGT TTATAAGGTG ATCGTAGGGT TAGATTCACA ATCGGTGAGC
GCGCAAGGTG AGGAGCTAAC TTTAGGCGTC GGTATGGAGC TTGAAGCCAG TGTGAAACTG
GAAAATCGTA GCTTAGTTCA ATGGATCTTA GAACCAATTT ATAGCTTGAG GAACAGATAG
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| Protein sequence | MEEPSPSKQL FRKEVLERGD SNSLGTVFLR QPKEYQWIAI LMFLVVSGLL VFLFVGTYTK
YADVFGVITV DKGLVKVSAR REGQIIEQMV KQGDSVTKGD LLYVISTDRH SSFDQNLDQT
ILIQQMELQS SLERDLKIAE EASGLELALI KSKILSKTTE IEQINAQLAI YDQRVELSGA
GLARNEKLLK AGHTNQAQLD KVIEDHLALQ SKRNDLLMKL NSTQSLLAEL SNELELKPGI
FKEKHNRLKR NLIENKQRIT EVSSNIDYRI YAPLTGVIGS QLTHVGEFVR PGNTMVSLIP
EGSKLQAELY VPATSIGFIK PEQEVSMRYS AFPYQHFGLH SGRVLSVSKV ISLPEELETS
VELTGAVYKV IVGLDSQSVS AQGEELTLGV GMELEASVKL ENRSLVQWIL EPIYSLRNR
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