Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3799 |
Symbol | |
ID | 6118148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4638605 |
End bp | 4639504 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635362 |
Product | glutamyl-tRNA synthetase class Ic |
Protein accession | YP_001762153 |
Protein GI | 170728127 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000213424 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000243395 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAACCAAG ACTCAGCCAT TACGCCAACG AGAACTCAAT CTGACTATAT TGGCCGCTTC GCTCCCTCTC CATCAGGACC TTTACACTTT GGTTCTCTCG TTGCGGCACT GGGAAGTTAT CTAAGGGCAC GTTCATTGGG AGGAAAATGG CTAGTTCGTA TCGAAGATAT CGACCCACCA CGAGAAGTGG CTGGCGCTGC AGACATGATA TTGCAAACAT TATCCGCCTA TGGATTAAAT TGGGATGGCG ACATCTTGTA TCAGAGTCAA CGTCTCGATA CCTATCAAGC AAAAATAGAT AAGCTTCTAT CACAAAATCA GGCCTACTAC TGCCAGTGCA CCCGTAAACA GATCCAAGCG ATGGGTGGAA GTTATGACGG CCGCTGCGGA CAACTCGAAA TCCCCCATAC CCATGGCGCT ATCAGGATCC GCAATACTGC TGGCGTGAAA CGTTTTCAGG ATCTGCATAT GGGTGATGTA TGTTTAGATA GCGATTTTGC AACCGAGGAC TTTATCATTA AGCGAAGCGA TGGCCTTTAC GCATATCAAC TCGCTGTCGT GATGGATGAT GCTTATCAAG GAGTCACTGA GGTCGTTCGT GGTTGCGATC TGCTTACCCC AACCTGCAGA CAGATCAGTT TAAACCAGCA GTTTAGTTAT CAAAGTCCAC TCTGGCTCCA CTTACCTCTG GTTTGTGATG CTCCAGGAAT GAAACTCTCT AAGCAAAACC ACGCTCAAGC GATCGACACA GACAAACCTC AAGCGAGCTT GAATGCCGCA CTCACTTTCC TAGGACAGCA AGCTGTAACA CCACAAAATG ATATTCGTGC AATGCTTGCA GAAGCGGTAG CTCAATTTGA TCTCAGTGAG ATCCCAAAAC AGGCTGAGAT TGTCCTTTAA
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Protein sequence | MNQDSAITPT RTQSDYIGRF APSPSGPLHF GSLVAALGSY LRARSLGGKW LVRIEDIDPP REVAGAADMI LQTLSAYGLN WDGDILYQSQ RLDTYQAKID KLLSQNQAYY CQCTRKQIQA MGGSYDGRCG QLEIPHTHGA IRIRNTAGVK RFQDLHMGDV CLDSDFATED FIIKRSDGLY AYQLAVVMDD AYQGVTEVVR GCDLLTPTCR QISLNQQFSY QSPLWLHLPL VCDAPGMKLS KQNHAQAIDT DKPQASLNAA LTFLGQQAVT PQNDIRAMLA EAVAQFDLSE IPKQAEIVL
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