Gene Swoo_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3799 
Symbol 
ID6118148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4638605 
End bp4639504 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content47% 
IMG OID641635362 
Productglutamyl-tRNA synthetase class Ic 
Protein accessionYP_001762153 
Protein GI170728127 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000213424 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000243395 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACCAAG ACTCAGCCAT TACGCCAACG AGAACTCAAT CTGACTATAT TGGCCGCTTC 
GCTCCCTCTC CATCAGGACC TTTACACTTT GGTTCTCTCG TTGCGGCACT GGGAAGTTAT
CTAAGGGCAC GTTCATTGGG AGGAAAATGG CTAGTTCGTA TCGAAGATAT CGACCCACCA
CGAGAAGTGG CTGGCGCTGC AGACATGATA TTGCAAACAT TATCCGCCTA TGGATTAAAT
TGGGATGGCG ACATCTTGTA TCAGAGTCAA CGTCTCGATA CCTATCAAGC AAAAATAGAT
AAGCTTCTAT CACAAAATCA GGCCTACTAC TGCCAGTGCA CCCGTAAACA GATCCAAGCG
ATGGGTGGAA GTTATGACGG CCGCTGCGGA CAACTCGAAA TCCCCCATAC CCATGGCGCT
ATCAGGATCC GCAATACTGC TGGCGTGAAA CGTTTTCAGG ATCTGCATAT GGGTGATGTA
TGTTTAGATA GCGATTTTGC AACCGAGGAC TTTATCATTA AGCGAAGCGA TGGCCTTTAC
GCATATCAAC TCGCTGTCGT GATGGATGAT GCTTATCAAG GAGTCACTGA GGTCGTTCGT
GGTTGCGATC TGCTTACCCC AACCTGCAGA CAGATCAGTT TAAACCAGCA GTTTAGTTAT
CAAAGTCCAC TCTGGCTCCA CTTACCTCTG GTTTGTGATG CTCCAGGAAT GAAACTCTCT
AAGCAAAACC ACGCTCAAGC GATCGACACA GACAAACCTC AAGCGAGCTT GAATGCCGCA
CTCACTTTCC TAGGACAGCA AGCTGTAACA CCACAAAATG ATATTCGTGC AATGCTTGCA
GAAGCGGTAG CTCAATTTGA TCTCAGTGAG ATCCCAAAAC AGGCTGAGAT TGTCCTTTAA
 
Protein sequence
MNQDSAITPT RTQSDYIGRF APSPSGPLHF GSLVAALGSY LRARSLGGKW LVRIEDIDPP 
REVAGAADMI LQTLSAYGLN WDGDILYQSQ RLDTYQAKID KLLSQNQAYY CQCTRKQIQA
MGGSYDGRCG QLEIPHTHGA IRIRNTAGVK RFQDLHMGDV CLDSDFATED FIIKRSDGLY
AYQLAVVMDD AYQGVTEVVR GCDLLTPTCR QISLNQQFSY QSPLWLHLPL VCDAPGMKLS
KQNHAQAIDT DKPQASLNAA LTFLGQQAVT PQNDIRAMLA EAVAQFDLSE IPKQAEIVL