Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3798 |
Symbol | |
ID | 6118147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4637965 |
End bp | 4638408 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641635361 |
Product | TraR/DksA family transcriptional regulator |
Protein accession | YP_001762152 |
Protein GI | 170728126 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1734] DnaK suppressor protein |
TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000388201 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000322165 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAGAAG GCACTAAAAA ACTTGGCGTG CTCGCTATCG CAGGTGTAGA ACCTTATCAG GAAAAACCTG GTGAGGAGTA TATGAACGCA GATCAGCTGG GCCATTTCAG AACGATTCTG GATGCTTGGC GTAATCAGTT GCGTGAAGAG GTCGACCGTA CTCTTAATCA TATGCAAGAT GAAGCAGCAA ACTTTCCAGA CCCTGTGGAC CGTGCCGCTC AAGAGGAGGA GTTCAGTCTA GAACTTCGTG CTCGTGATAG AGAGCGTAAG CTAATTAAGA AGATCGAAAA AACACTTCAG AAAATTGAAG AGGATGATTT CGGCTTCTGT GACTCATGCG GCATCGAAAT TGGTATTCGT CGTCTCGAAG CTCGTCCAAC AGCCGATCAA TGTATCGATT GTAAGACGCT TGCAGAGATC AAAGAAAAGC AGATGGCTGG CTAA
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Protein sequence | MPEGTKKLGV LAIAGVEPYQ EKPGEEYMNA DQLGHFRTIL DAWRNQLREE VDRTLNHMQD EAANFPDPVD RAAQEEEFSL ELRARDRERK LIKKIEKTLQ KIEEDDFGFC DSCGIEIGIR RLEARPTADQ CIDCKTLAEI KEKQMAG
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