| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3795 |
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| Symbol | |
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| ID | 6118144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4634152 |
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| End bp | 4635129 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635358 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001762149 |
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| Protein GI | 170728123 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.264433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000426063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTATACCC ATTTTGAAGA GTTTAGTATT AACACTGAGA CATTTGAGTT GGTGATCGCC
AAAGAGCTTG TTCAACTCGA TGAACGTGTG TTTCAACTAT TCAAGTTACT CATTGAAGAT
TACCCCGCCC ACTGTAGTAA ACAGAGGTGC TTGGACCGTA TCTGGCCTAA TACCGTCGTT
TCAGATATGT CACTGGCTAA ACTCGTTTCA GATACGCGCA AGTTGTTTAA AAAGGCTGGT
TGCCAAGCAC CTATTATTGA AACGGTCCAT GGCCGTGGAT ACCGTTTATC TAAAGAGTTA
GGCCAGCAGC TTTCCAGTGT GGATACTCTC GTGGGTTCTG AATCTCAACT GCTGCCTAGT
GGCTTTGAAC AAGTTGGGAG GGAACCGAGC GCTAAAATAC CAGCTCAAGA GGAGTCATTA
TCTTTCACTG AGAAAACCCT CGCTCAAAAA GGCAATCTGA TAGTCGGTTT TTTATTGTTG
ATTTTTATGG CTTTTACACT CAACCACTAC CTAATCCCCT CTGTGCTTAC ATCAGCTCAA
ACTCCCGTGT TAAAAAACAA TCCTCAAGAA GTGGTGTACA GCCAATCTCC CGATGCCATA
GGACGTATTT TATGGGTCGA TGATCATCCC GATAATAATG TTGAGGAGAG GGAGGTATTT
CGTCAGCAAA ATATCGGTGT CTATAGCACA ACGAGTACCG ATGAGGCTTT ACTGCTTCTC
TCTATTTATG GCTATGAGAT GGTGATCTCT GATGTGGGAA GGAGGGAAGA ACCTCTTGCT
GGGCTGAAAC TGTTAAGAGT GCTGCGGGAG AGTGGTACAG AGATCCCCTA TATTATTTAT
ACCCTTAATG ATACACCCCA GCTACATGAA GCCGTCAGTA AAAGTGGCGG TCAGGGAGTA
GCTGTTGATG CCGAGAGCCT ATTTAATTTA GTGATGCCCC ACTTTAAAAC GCTTGAGAGT
GAAATAAAAA ATCAATAA
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| Protein sequence | MYTHFEEFSI NTETFELVIA KELVQLDERV FQLFKLLIED YPAHCSKQRC LDRIWPNTVV
SDMSLAKLVS DTRKLFKKAG CQAPIIETVH GRGYRLSKEL GQQLSSVDTL VGSESQLLPS
GFEQVGREPS AKIPAQEESL SFTEKTLAQK GNLIVGFLLL IFMAFTLNHY LIPSVLTSAQ
TPVLKNNPQE VVYSQSPDAI GRILWVDDHP DNNVEEREVF RQQNIGVYST TSTDEALLLL
SIYGYEMVIS DVGRREEPLA GLKLLRVLRE SGTEIPYIIY TLNDTPQLHE AVSKSGGQGV
AVDAESLFNL VMPHFKTLES EIKNQ
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