| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3793 |
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| Symbol | |
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| ID | 6118142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4630676 |
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| End bp | 4633204 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641635356 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_001762147 |
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| Protein GI | 170728121 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000841118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGGATCAGT TACCCGTTCT AAGCCTGCTT ACTCCGTTGA GAGAGGCATT TAGCCAACAT
CACCAAGTCA TATTAGAGGC GCCTACCGGT GCAGGAAAGT CCACAGCCTT ACCTTTGGCC
ATGCTCGATT GGGATGAGCT GAAGGGGAAA ATCCTTATGC TTGAACCCAG ACGTGTGGCT
GCAAGAAGTG TGGCTCACTT TATCGCCTCA CAGCGTGGCT GTCAGGTGGG AGAAGATGTG
GGATATCGGG TTCGTGGCGA GTCTCGCAGT CAAGCATCGA CCCGTTTAGA GATCGTCACT
GAGGGGGTGT TAACCCGTAT GATCCAGCAA GATCCCGAAT TAAATGGGAT CGATATGATT
ATCTTCGATG AGATCCATGA GCGCCACTTG ACCACAGACC TCGGCCTAGC CTTAGCCTTG
GAGATACAGG GCTCATTTCG TGAAGATTTG AAGATCTTAG CGATGTCAGC CACGCTATCT
GGCCTACCTT TAACTGAACT TATGCCTAAC GCTATTTCAC TTAAAAGTGA GGGGAGAAGC
TTTCCCGTAG AACTGGCTTA CCGTGCAAGC ACTTCGTCCC AACAAGGCCG CTCTACCCAT
CATTGGATTG AGCATATGGG CAGAGTGATT GTTGAGCTAC TCACACTGGG AGATGAGAAG
GGGATATATT CCCATGGCTC TTTGTTGGCG TTTCTTCCTG GACAGGGTGA GATTGTTAAA
TTGCAAGAGT TTCTGGTTAG CCGCTTGGAT CTTAACCTGT TCTCTATCTG TCCCCTCTAT
GGCAGCTTGC CACCTAAAGT GCAGGATAAA GCGATTGCTG AGCCTAGTGA TGGCAAACGT
AAAGTGGTGC TCTCAACTAA CGTTGCTGAG TCGAGTTTGA CCATCCAAGG GATCACTATG
GTGGTTGATT CAGGTTATAA GCGTCAGGCA AGTTTTAATG CCAGAACAGG GGTCACTCGT
TTATCTCTTA AGCGAATAAG TCAGGCATCG GCTGCCCAGC GGGCGGGACG TGCGGGGCGT
TTGGCCCCCG GTTACTGTTT GCGTCTGTGG AGTCAAGAGG AGCAAGGAAG ATTACTTAAG
GCTGATGAAC CTGAGATCTT ACACTCAGAT CTTATCCCTA TGGTGCTCGA TGGCGCTTGC
TGGGGAGTCA AAGCACTCGA TGAGTTACCT ATGCTAACTA CCGCCTCCCA ACCAAATGAA
AATGCGGCTT GGCAGTTGTT GGAACAGCTT GATGTCGTAG ATAAACAGCG AAAAATAACA
CCCCATGGCC AGCAAGCCTA TGAGCTGGGT TGCCACCCTA GATTAGCTCA TATGTTGCTT
AAAGCTAAAT CACTGACCAA GGGGACGCAT CTAGAGCTTG TGGGGCTAGC CTGTATTCTT
GCTGGGGTGT TGGAGTCCCG CACCCGTGGT CGACACGGTA TAGATATTAG TGGCTATCTA
AGAGAGGCAG TTCAAGGAGA GTCTGGGAAG CAAATACGCC AATGGATGAG GAGATTAAAT
GTTAATACAG ATCTCCTAGC TTGTATCACC CATGCCTGTA ATGAAGATAT CGCTTTCCTG
CTTGCCTTGG CGTTTCCTGA CCGAGTGGCA AAAAGCCGCG GCGTCTCCGG TTACCTATTG
GCCAATGGTA CCGGTGTTAC TTTGCCTGAG CATGATGCAC TTACTTCGGC TGATTGGTTG
GTGGTGGCAG ACTTTCAAGA GAGTGAGGGG CGCACGAGTG GTCGGGTCTA CTTAGCGGCT
CAAATCGATG TCGATTCCTT TAAAAGTCGG CTTAAATTTC TAGTTGAGAA GCAGGAATAT
TGTGGTTGGG ATGAGGTTAA AGGGCGTTTT TATGCCGAAT CTCAACAGCG TATTGGCCAG
ATAGTGTTGA GTAAGTCGGC ATTAACTAAG CCAGATCCTG AGCAGATAAA GTTGGCTATT
TTTGAGCAGC TTCGCAATAA AGGCTTAGGT TTGCTGAATA TGAATGACAA GGCGTTGCAG
CTGCAGAACA GGTTGATGCT AGCGGCGACA CTCGACCCAG ACCAGGCTTG GCCAGATATC
AGTCATGGCC AGCTTATCGA TACATTAGCG GATTGGCTTG GCCCCTATCT CAATGATGTC
AAAAGCTTGT CACAATTGAG GTCTCTTGAC TGTTATACTC TGCTGCTTAA TCAGCTTGAG
TGGAGTGCTC AACAGCGGCT AGAGACTCTT TTTCCTACTC ACTGGCCTAT GGCGACAGGA
ACTCGAGCAG GGATCACCTA TGATGATGCA GGAAGGGCCT TGCTCAGTGT GCGTCTTCAG
GAAGCATTAG GGATGGCTCA AAGCCCTGTA TTAGCCAATG GTAAGCTAAC AGTCACCATG
GAGTTGCTTT CTCCTGCTCA TAGACCCCTT GCTTTGACGG CGGATCTGGC CAGTTTTTGG
CAAGGTCCCT ATGTTGAAGT GAAAAAGGAG ATGAAGGGGC GATACCCGAA ACACCTTTGG
CCTGATGACC CAGCTAATAC TACGCCGACG CGCTTTACTA AAAAGAAGAC CTTAAATCAG
AATTTGTAA
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| Protein sequence | MDQLPVLSLL TPLREAFSQH HQVILEAPTG AGKSTALPLA MLDWDELKGK ILMLEPRRVA
ARSVAHFIAS QRGCQVGEDV GYRVRGESRS QASTRLEIVT EGVLTRMIQQ DPELNGIDMI
IFDEIHERHL TTDLGLALAL EIQGSFREDL KILAMSATLS GLPLTELMPN AISLKSEGRS
FPVELAYRAS TSSQQGRSTH HWIEHMGRVI VELLTLGDEK GIYSHGSLLA FLPGQGEIVK
LQEFLVSRLD LNLFSICPLY GSLPPKVQDK AIAEPSDGKR KVVLSTNVAE SSLTIQGITM
VVDSGYKRQA SFNARTGVTR LSLKRISQAS AAQRAGRAGR LAPGYCLRLW SQEEQGRLLK
ADEPEILHSD LIPMVLDGAC WGVKALDELP MLTTASQPNE NAAWQLLEQL DVVDKQRKIT
PHGQQAYELG CHPRLAHMLL KAKSLTKGTH LELVGLACIL AGVLESRTRG RHGIDISGYL
REAVQGESGK QIRQWMRRLN VNTDLLACIT HACNEDIAFL LALAFPDRVA KSRGVSGYLL
ANGTGVTLPE HDALTSADWL VVADFQESEG RTSGRVYLAA QIDVDSFKSR LKFLVEKQEY
CGWDEVKGRF YAESQQRIGQ IVLSKSALTK PDPEQIKLAI FEQLRNKGLG LLNMNDKALQ
LQNRLMLAAT LDPDQAWPDI SHGQLIDTLA DWLGPYLNDV KSLSQLRSLD CYTLLLNQLE
WSAQQRLETL FPTHWPMATG TRAGITYDDA GRALLSVRLQ EALGMAQSPV LANGKLTVTM
ELLSPAHRPL ALTADLASFW QGPYVEVKKE MKGRYPKHLW PDDPANTTPT RFTKKKTLNQ
NL
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