Gene Swoo_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3786 
Symbol 
ID6118135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4620398 
End bp4621099 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content44% 
IMG OID641635349 
Producthypothetical protein 
Protein accessionYP_001762140 
Protein GI170728114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000100132 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000452551 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTCTAA CGCCTTACTT TAAAAAAGAA AATCAAACAG TCACAGTAAC TCCTTCTCAG 
GCAAGCGATT TTGCAAAGGT TGTGGCTCAG GATTTCAACC CAATTCATGA CGTGGGCGCA
AAGCGCTTTT GTGTACCCGG CGACCTGCTA TTTTCTTTGG TTTTAGGTGA GTATGGCCTA
AGCCAAAAGA TGAGCTTTAC CTTCCAAGGT ATGGTTGGTG ATGGTGTGAA ATTGCAGTTT
CCTGGTTCGA TTGGCGATGC ATTTGATATC CATGACGATA AAGATAAGCT TTATTTGAAT
GTTGAGCGAC AGGGTGAGAA CAGAAACTGT GGAACCCAAA TAGAGTCGTT TATCCGTAGT
TATGTGGCCT TTTCAGGATT GAACTTTATC CATGTGCTCG TGCCTATGAT GAAGCAACAT
CAGGTGATGA TTAACCCTGC TCGTCCTTTG GTTATCTATG AAAGTATGTC TTTCGATCTG
ACGACACTCG ATTTCACTCA AGTGACGCTA TCTTTGGTTG AACAGGAGTT AGTGGTCGAG
GGTAAGCGCG GCAATGTGAC CCTGAAGTTT GAACTGCACA GTGGCGATAC TTTAGTGGGA
ACAGGTGTGA AAACATTAGT TATGAGCGGA CTTCGTCCCT ATGAAGCGGA TAAAGTGCAA
GAGATGTGCG ATACCTATGA AGGGCGCAGA ACGAGCTTTT GA
 
Protein sequence
MFLTPYFKKE NQTVTVTPSQ ASDFAKVVAQ DFNPIHDVGA KRFCVPGDLL FSLVLGEYGL 
SQKMSFTFQG MVGDGVKLQF PGSIGDAFDI HDDKDKLYLN VERQGENRNC GTQIESFIRS
YVAFSGLNFI HVLVPMMKQH QVMINPARPL VIYESMSFDL TTLDFTQVTL SLVEQELVVE
GKRGNVTLKF ELHSGDTLVG TGVKTLVMSG LRPYEADKVQ EMCDTYEGRR TSF