| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3785 |
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| Symbol | |
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| ID | 6118134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4618326 |
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| End bp | 4619699 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635348 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_001762139 |
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| Protein GI | 170728113 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000668387 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000307467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTTTC ACGCGCTTTT AGCCGATATC AACGCCATTG TCTGGGGACC AGTTACCCTG
TGCTTATTGG TTGGAACCGG CCTTTACCTC ACCCTTAGAC TGAAACTTAT CCAAGTCTTT
AAGCTGCCTA TGGCACTGGG CTTACTGTTT AAACCAGCTA ATGGTAAGGG GGACTTATCC
TCTTTTGCTG CACTGTGTAC TGCACTGTCA GCCACAATCG GTACCGGCAA TATTGTTGGT
GTGGCCACTG CAATTAAAAT TGGCGGCCCA GGGGCACTAT TTTGGATGTG GTTAGCAGCC
TTTTTCGGTA TGGCAACTAA GTATGCAGAA TGTATGCTCG CAGTTAAGTA TCGCACCACA
GATGCTCGGG GACAGATAGC CGGTGGCCCC ATGTACTATA TTGAGCGCGG TTTGGGATTA
TCTTGGCTAG CTAAGCTGTT TGCTATTTTT GGCGTTGGGG TCGCCTTTTT TGGGATAGGC
ACTTTTGCCC AAGTTAATGC GATCAGCGAT GCGTTAACCA TCGCTTTTCA TGTGCCCGCT
TGGGCTACCT CATTGGTACT GACCATCTTG GTTGCCGCAG TCACCTTAGG TGGGGTAAAA
CGTATCGCTA ACGTGGCGCA AAAGTTAGTA CCCACTATGG CACTGGGATA TGTACTAGCT
TGTCTCTGGG TGCTGATTAC TTTTTCAGAA CAGATCCTTC CAGCGTTTGA GTTGGTGATT
CATTCAGCCT TTACTCCCAT TTCGGCTGCT GGTGGTTTCC TTGGCGCTAC TGTTGCTCAA
GCGCTACAAA TTGGTATCGC TCGCGGTGTA TTCTCCAATG AGTCAGGCCT TGGTAGTGCA
CCTATTGCCG CTGCTGCAGC TAAGACTAAC GAGCCTGTGG AGCAAGGTCT TGTGAGCATG
ACCGGCACCT TCTTCGATAC TATTATCATC TGCACCATGA CTGGGTTGGT GTTAATTATC
ACTGGTGTGT GGAGTGGCGA TACTGCAGGG GCGGCGATGA CCAGCGCAGC ATTTGCTAGC
GGTGGCTCTG TGCTTGTAGG TCAATATTTT GTGACTGTGG CACTCGTTTG TTTTGCCTTT
ACCACGATTT TAGGCTGGCA TTATTACGGT GAGCGGTGCT GGTATTACTT GATGGGAGAG
CGTGGATTGC GTGCTTATCA GGGAGTATTT CTTGGCTTAA TTGCCCTTGG CTCCTTTATT
CATCTGGATA TGATCTGGCT GCTAGCCGAT ACCGTGAATG GTTTAATGGC GATTCCTAAT
TTGATCGCGA TTATCGGCTT GCGTCATATT ATCTATTTGG AAACATTAAG CTATTTCACT
AGGTTTGATA AAAAGGATTT AGAGGGTACT CCCTCTGACG TGTTACCGAG TTAA
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| Protein sequence | MNFHALLADI NAIVWGPVTL CLLVGTGLYL TLRLKLIQVF KLPMALGLLF KPANGKGDLS
SFAALCTALS ATIGTGNIVG VATAIKIGGP GALFWMWLAA FFGMATKYAE CMLAVKYRTT
DARGQIAGGP MYYIERGLGL SWLAKLFAIF GVGVAFFGIG TFAQVNAISD ALTIAFHVPA
WATSLVLTIL VAAVTLGGVK RIANVAQKLV PTMALGYVLA CLWVLITFSE QILPAFELVI
HSAFTPISAA GGFLGATVAQ ALQIGIARGV FSNESGLGSA PIAAAAAKTN EPVEQGLVSM
TGTFFDTIII CTMTGLVLII TGVWSGDTAG AAMTSAAFAS GGSVLVGQYF VTVALVCFAF
TTILGWHYYG ERCWYYLMGE RGLRAYQGVF LGLIALGSFI HLDMIWLLAD TVNGLMAIPN
LIAIIGLRHI IYLETLSYFT RFDKKDLEGT PSDVLPS
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