Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3783 |
Symbol | |
ID | 6118132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4613680 |
End bp | 4614333 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641635346 |
Product | hypothetical protein |
Protein accession | YP_001762137 |
Protein GI | 170728111 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0112112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000154653 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGAGG TTAATGAGAC GATTGTTGTG GGTACGGGTG CGATTATTGA ACGGTTGCTA AAAGGCGAGT TTATCTGCCG TACTACCGAT GAAGAGAGCT GGCGTGCGTT AAAAAATCCC AGTACTCGTG AGCGGGTCGA GACCTACCTA AATCAGATTA ATCGTACTAT CGGTTCCGCG GGCGAGGGGG AGGTTTTTTT CTGTGGTTAT CAGCAGTTGG GCGACAGTGA ACGTAAAGTG ATCTCCTCTC AGTTTAAAGA TATCTGTAAT GCGCTTATCC CGTTAGTGGA GTGGCTGGTC CTAGTTCAGG AAGCCAGCGG GCAAGATGCG CCACTTTCTG AAGGTGCAGC GGTGCGCTTA ACTGAGCTGC AAACACGGAT TGAAGACACG CCAGCGTTTC GCGAACAACT GGCTAAAATA AGTCACTATC GGCTATTTGG CTCGACCAGT ACGAATGTCG ATGCCCAGAT TAAGTTGGTG TTTAAGCGTT TGGTGGAGCT TGGCTATCTG GCCAGACCCA ATGCTGAGAA GCAGATCTTT ATCGCAACGG GTAAATTAGA TTATCTCTAT GAGGTGATCC GGTTTATCGA TGAGACTGAG GGTTTGAGTT TGGAAGCTCA AGCTGAAACT GCGACCCAAA GGGATCTGGT TTAA
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Protein sequence | MSEVNETIVV GTGAIIERLL KGEFICRTTD EESWRALKNP STRERVETYL NQINRTIGSA GEGEVFFCGY QQLGDSERKV ISSQFKDICN ALIPLVEWLV LVQEASGQDA PLSEGAAVRL TELQTRIEDT PAFREQLAKI SHYRLFGSTS TNVDAQIKLV FKRLVELGYL ARPNAEKQIF IATGKLDYLY EVIRFIDETE GLSLEAQAET ATQRDLV
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