| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3781 |
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| Symbol | |
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| ID | 6118130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4610665 |
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| End bp | 4611930 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635344 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_001762135 |
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| Protein GI | 170728109 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0549433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000150842 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATTAAGT CACTCTCAAC ACGGATCTTT ATTGGTCTGT TTTCCGGATT AATTTTCGGT
TCCATCATTC AATATCTACT TGGTGATATT GGATTCTTCT CCGGTACAAT TGTCGAGATT
TCATCTGGTG TCGGCACCAT GTTCGTTAAT ATGATCATGA TGTTAGTCGT CCCTTTGGTA
TTTGTCAGTA TTGTGTGTGG AGTGTTAGAG CTTAAAGATT TGAAGAGTTT TGGCCGCTTG
GGCGGAAAAA CATTCGGTTT TTATATTATA AATACCTTAG TTGCCATCTT TGCAGCACTC
GCAGTGGCAC TGCTGTTAGA GCCCGGTCGC GGTGTTGATA TGTCTGGCGG TACGGGAGCG
GTGATCACAG CTACCGAGTT ACCCAACCTT GTTCAGCTGA TCGTAAATAT TGTGCCTAAC
AATCCTGTGT CAGCGTTTAC TTCGGGTAAT ATGCTGCAGG TTATCTTTAT GGCCTTGCTA
GTTGGGGGAG TGATAAAGTC TCTTGGTGGT GCGGTCCCTT TGCTGGTGCA GGGTTTTCAG
GAGGGCAATA AGTTAATGAT GAAGCTGATC ACTGTAGTGA TGCAGCTGGC ACCTTTCGGT
GTTTTTGCTC TTATGCTTAA GTTAGGTGCG ACCCTAGAAG CTGAGATTTT TGTTAGTGTG
CTTGAGTACC TGTTTGTGAT TCTTGGTCTC TTATTGGCTT GGATCTTTAT TGTTTACCCT
ATCGCTGTTG GCGCTTTTAC CTCTGTGTCG GCCAAAGAGT TCCGCGCTAA GACCCGTGAA
CAGATCTTGT TTTCTCTCTC TACTGCCAGC TCAAATGCCA CGATTCCAGT GACCATGCGT
ACCTTGACTG ACAAGTTAGG TGTGAAGCGT GCTGTTGCTG GTTTTGGTGT TCCGCTAGGG
GCAACCATGA ATATGGGTGG TGTTTCTATC TATATTACTA TCGCCATCTT CTTTGTGGCG
AATGCATTTG GGGCACCTAT TGCGATGGAG CAACTGCCTG CGCTGCTCTT TAGTATTTTC
CTACTCTCTG TTGGCGCCGG TGGTGTACCT GGCGGCGGTA TGGTGATGAT AGGTGTTCTT
ATTCATCAGA TGGGATTACC TGTTGAAGCG TTTGCTATCG TTGCTGCACT CGATCGCTTG
ATCGACATGG TGTTAACCTC ATGCAATGTT GTTGGGGATA CTGCGGTGTT AACTATCGTT
GATTCAACTG AGAAAGAGCA TGATGAGGCT GCGGCAGAAG GAGCTAGGGT TTCAGCTAAA
GCCTAA
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| Protein sequence | MIKSLSTRIF IGLFSGLIFG SIIQYLLGDI GFFSGTIVEI SSGVGTMFVN MIMMLVVPLV
FVSIVCGVLE LKDLKSFGRL GGKTFGFYII NTLVAIFAAL AVALLLEPGR GVDMSGGTGA
VITATELPNL VQLIVNIVPN NPVSAFTSGN MLQVIFMALL VGGVIKSLGG AVPLLVQGFQ
EGNKLMMKLI TVVMQLAPFG VFALMLKLGA TLEAEIFVSV LEYLFVILGL LLAWIFIVYP
IAVGAFTSVS AKEFRAKTRE QILFSLSTAS SNATIPVTMR TLTDKLGVKR AVAGFGVPLG
ATMNMGGVSI YITIAIFFVA NAFGAPIAME QLPALLFSIF LLSVGAGGVP GGGMVMIGVL
IHQMGLPVEA FAIVAALDRL IDMVLTSCNV VGDTAVLTIV DSTEKEHDEA AAEGARVSAK
A
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