Gene Swoo_3774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3774 
Symbol 
ID6118123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4598911 
End bp4599987 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content38% 
IMG OID641635337 
Producthypothetical protein 
Protein accessionYP_001762128 
Protein GI170728102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.448392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00135231 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATAAGT TGTTAGTTTT AGTTTTATCT CTGTCAATAT CGCATAATGT TTGTGCAGAA 
CAGTATATTA AAAGCTTAAA TGCCAAAGCG AAACATAAAA CAGATGTCAT GGTTTTGGGG
AGCACACACC TCAATACAAT TAAGGTGGAG CTAAACAAGG ATGATTTTAC TCCCGTCATC
CAAATGCTAG AAACATTTAA CCCTACCGCT GTCGCTATCG AATCACTAAG GGCGGAAGAC
ATACTCACCA TGCTCAATGG ATCAGAAGAG CATCAAGCAG TTTTATCACA ATTTGTCGGT
GATACACTTT TGTCATTAGC TGAAAAAGAG CAGAAAGCTT TAGGCGTTTC AGCTAATGAC
GCGATTAACA AAATGAATAA ATTGCTGGCT AAAAACCAGT TTAGCCAGCA GAAAAGAATA
GAGCTTATCA AGCTAGCTAT AGCAGGCTAC AACCGTGATA CAGCTGCACT GCACTGGAGC
CTACTAGATG CTAGTATCCC TAATGATAGT CTTTCAAAAG AACTGCAAGC ATTTCTTCAT
AAGCAAACAA ATCGTAACAA CGAAATAAAT GTCATTGCAG TCGAATTAGC TGAAAGACTT
GATCTAAATC GTTTATATCC TATTGACGAT CATTTAGATA AAGACATGTT CGGTAACATT
GCTAGCGAGT TAATGCCATC TTACCAAAAA TCAACTTTTT GGGCTGAATT CCACTCAAGC
GAATATATAA CCAAACCTGA GAAATTAAAA TCTCAAGCAC TGGAGACAGG AGATTGGCTT
CCTCTGTTTT ACTGGTTCAA TAGCGAAGAG TATCAATCTG ACGTAATCAA TAAGGAATGG
TTAGGTTTTG TAGATAAAGA TTTGGATCCT AAATCTGCAC TGGCGAGGGT CGCCCTATGG
GAGATACGGA ACCTCAATAT GGCTTCAAAT ATAATGCGGG TAGTCGCTGA TCACATTGAC
GGTAGAGTTG TTATTATAAT AGGAGCCAAT CACAAGGTTT TCTTAGAGCA ATACTTATCA
AATATGGTCG GAGTCAATAT CGTACAATTT GAAGATTACG CACCGATGAG TCATTAG
 
Protein sequence
MYKLLVLVLS LSISHNVCAE QYIKSLNAKA KHKTDVMVLG STHLNTIKVE LNKDDFTPVI 
QMLETFNPTA VAIESLRAED ILTMLNGSEE HQAVLSQFVG DTLLSLAEKE QKALGVSAND
AINKMNKLLA KNQFSQQKRI ELIKLAIAGY NRDTAALHWS LLDASIPNDS LSKELQAFLH
KQTNRNNEIN VIAVELAERL DLNRLYPIDD HLDKDMFGNI ASELMPSYQK STFWAEFHSS
EYITKPEKLK SQALETGDWL PLFYWFNSEE YQSDVINKEW LGFVDKDLDP KSALARVALW
EIRNLNMASN IMRVVADHID GRVVIIIGAN HKVFLEQYLS NMVGVNIVQF EDYAPMSH