Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3753 |
Symbol | |
ID | 6118102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4567159 |
End bp | 4568193 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635316 |
Product | hypothetical protein |
Protein accession | YP_001762107 |
Protein GI | 170728081 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.30057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACTT CAACATTAGC CCTCATCACA TTAGGACTCT TTAGCAGTTC GAGTTACGCA GCTTTCGAGT TTGATCTCGG TGAAGACAAT AAGCTCAAAT TCGGAGGGTA TCTTAAAGCT GATGTCCGCC ACGTATCCGG CGAAGTGCCT TATCGCCCAT TTTGGATAGC AACGGGCGCT ACAGGTGAAG ACTCATCACA AACTAACTTC ACCATGCGAG AGTCAAGATT TAACGCCAGC TACACCCATG GCAAGGTGAT GGGATTTGTG GAGATGGATT TTTACGGCTC CGATGGCAGC GAGGCGGTCG TCAATAACTA CGACCCAAGA TTACGTCACG CCTTTATCAA ATATGACAAC TGGCTTGTAG GTCAAACATG GTCAACCTTC ATGCCACTGA CAGCGATTCC TGAGACCTTA GATTTTGGTG GCCCCCATGT CGGTGAAGCC TTTATTCGTC AAACTCAGAT CCGCTACACC TATGGTGGCT TTCAGTTCGC ATTGGAAAAT CCAGAAACCA CTGGCGCCGA CAACAAGAAT GATGCTATTC CCGATATTGT TGGACGCTAC ATACATAAAG CCGATTGGGG AGAGCTTGGG GTTGCCGCAT TAGTCCGTCA ACTTGACAGC GATGGCATAG ATAAAACCAC TGCCGCATTT AACCTTTACG GTAAGTTGTT AATTGGAGAA AGGGATGATT TTCGTTTTCA GGTCAATGTT GGAGAGTCAG GCAGGTATGT GGCACCGGGG CTGACCACAG ATATCATTCC TGATGGTGAC AATAGCGTAC CGGAAGAGAC CACTGCCTAT TACGCCGCCT ACCGTCATTT CTGGAGTGAG AGTTATCGCA GCACCCTCTT TTACGGTCAT GCAGAAACCG ACATTCAAAA TAGAGAGAGA CAGATGTGGG GAGTAAACCT GATTAAACAG CTCACGCCAC ACCTGTGGAC AGGGATAGAG ATCGGTAATT ATGAGGTCAG TGATGCCGAT GCAGACTCAA CTTACCTGCA GTTCTCAGTG AAATATGCTT TATAA
|
Protein sequence | MKTSTLALIT LGLFSSSSYA AFEFDLGEDN KLKFGGYLKA DVRHVSGEVP YRPFWIATGA TGEDSSQTNF TMRESRFNAS YTHGKVMGFV EMDFYGSDGS EAVVNNYDPR LRHAFIKYDN WLVGQTWSTF MPLTAIPETL DFGGPHVGEA FIRQTQIRYT YGGFQFALEN PETTGADNKN DAIPDIVGRY IHKADWGELG VAALVRQLDS DGIDKTTAAF NLYGKLLIGE RDDFRFQVNV GESGRYVAPG LTTDIIPDGD NSVPEETTAY YAAYRHFWSE SYRSTLFYGH AETDIQNRER QMWGVNLIKQ LTPHLWTGIE IGNYEVSDAD ADSTYLQFSV KYAL
|
| |