| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3751 |
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| Symbol | |
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| ID | 6118100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4565317 |
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| End bp | 4565829 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635314 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001762105 |
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| Protein GI | 170728079 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.602482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CACATACTCT ACTCGGTAAA CTACTGGATA GCTTAGGTTA TCTCTGCGCC
ATTTTAATGA TTTTGATGTT ATTTAATGTC TTTTATGACG TTGTGATGCG CTACCTATTC
AATAACATCT CCATTGCGAT GCAAGAGCTG GAGTGGCACC TATTCTCCGC CATGTTTATG
TTCGGAATAG GTTACACACT GAAGGAGGAT GGGCATGTAA GGGTAGATAT CTTCTACGAC
AACCTAAGCC GAAAAACTCA AGCTATGATC AACATCTTAG GGGTACTCAT CACGGTATTT
CCCTTTAGCC TACTTATCAT CTATTTCGGT GCCGCTTTTG TTGAGGATGC CTATCAACTC
GGCGAGAAAA GCCCAGATCC CGGCGGACTC AGTTACTTCT GGATCATAAA GTCAGTCATT
CCACTCTCCT TTGTCTTCGT GATCATCGCA GGGATATACC GATTAATCGG TGAAGTATCA
GTCCTGCTTG GCTCACCAGT GGAGGCAAAA TAA
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| Protein sequence | MKKTHTLLGK LLDSLGYLCA ILMILMLFNV FYDVVMRYLF NNISIAMQEL EWHLFSAMFM
FGIGYTLKED GHVRVDIFYD NLSRKTQAMI NILGVLITVF PFSLLIIYFG AAFVEDAYQL
GEKSPDPGGL SYFWIIKSVI PLSFVFVIIA GIYRLIGEVS VLLGSPVEAK
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