Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3749 |
Symbol | |
ID | 6118098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4563253 |
End bp | 4563777 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641635312 |
Product | cache type 2 domain-containing protein |
Protein accession | YP_001762103 |
Protein GI | 170728077 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4564] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACTTCA AACAGAAGAT TATTGCACTC AGTATTCTTC CGCTAGTGCT CTCAATGCTG ATTATTGTTT TGGCGTTACA TTATCAATCT GAACTCTTAT CGGAGCAGAG TGGGGCATCT TATCGAGAGA AGATCCTTGA GTTAAGAAAG CAGCAGCTGC AATCAAATAT CGAGCTAGCG ATGGGAGCGA TTAGCCATAT TTATCAGGCT GCCAGTGAGG AGGACTTGCT TGCCCAGAAG CAGGTTGCTG AGATCCTTAA TACCTTGCAA CACGGCGATG ATGGCTACTT TTTCGTTTAT AGCGACAGAG GCGTCAATAT TGTTCATCCT CGTCAGCCTT ATCGTGTCGG CAAAGATCTA TGGGATTGGG TTGATGTGTC CGGTAATCCC TTAATTCAGA TCTTGATCTC CAATGCGCAG CAAGGGGGCG GTTTCATGAA TATCTGTGGG AGAAGCCTTC AACGGGGTTA CTGGCTAAGA AGCTTGCTTA CTCTGTCATG TTGGATAAAT GGCGTTGGAT GGTAG
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Protein sequence | MDFKQKIIAL SILPLVLSML IIVLALHYQS ELLSEQSGAS YREKILELRK QQLQSNIELA MGAISHIYQA ASEEDLLAQK QVAEILNTLQ HGDDGYFFVY SDRGVNIVHP RQPYRVGKDL WDWVDVSGNP LIQILISNAQ QGGGFMNICG RSLQRGYWLR SLLTLSCWIN GVGW
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