Gene Swoo_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3749 
Symbol 
ID6118098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4563253 
End bp4563777 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content46% 
IMG OID641635312 
Productcache type 2 domain-containing protein 
Protein accessionYP_001762103 
Protein GI170728077 
COG category[T] Signal transduction mechanisms 
COG ID[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACTTCA AACAGAAGAT TATTGCACTC AGTATTCTTC CGCTAGTGCT CTCAATGCTG 
ATTATTGTTT TGGCGTTACA TTATCAATCT GAACTCTTAT CGGAGCAGAG TGGGGCATCT
TATCGAGAGA AGATCCTTGA GTTAAGAAAG CAGCAGCTGC AATCAAATAT CGAGCTAGCG
ATGGGAGCGA TTAGCCATAT TTATCAGGCT GCCAGTGAGG AGGACTTGCT TGCCCAGAAG
CAGGTTGCTG AGATCCTTAA TACCTTGCAA CACGGCGATG ATGGCTACTT TTTCGTTTAT
AGCGACAGAG GCGTCAATAT TGTTCATCCT CGTCAGCCTT ATCGTGTCGG CAAAGATCTA
TGGGATTGGG TTGATGTGTC CGGTAATCCC TTAATTCAGA TCTTGATCTC CAATGCGCAG
CAAGGGGGCG GTTTCATGAA TATCTGTGGG AGAAGCCTTC AACGGGGTTA CTGGCTAAGA
AGCTTGCTTA CTCTGTCATG TTGGATAAAT GGCGTTGGAT GGTAG
 
Protein sequence
MDFKQKIIAL SILPLVLSML IIVLALHYQS ELLSEQSGAS YREKILELRK QQLQSNIELA 
MGAISHIYQA ASEEDLLAQK QVAEILNTLQ HGDDGYFFVY SDRGVNIVHP RQPYRVGKDL
WDWVDVSGNP LIQILISNAQ QGGGFMNICG RSLQRGYWLR SLLTLSCWIN GVGW