| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3738 |
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| Symbol | |
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| ID | 6118087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4551896 |
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| End bp | 4553110 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641635301 |
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| Product | TonB family protein |
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| Protein accession | YP_001762092 |
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| Protein GI | 170728066 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.595285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAATT GGTTAATGGA GCAAACCATA CTCATCAGCT TAATCTGTGC CATTTTATTA
GTCGGTCACA AACAGATTTT GAAACTCTTC GGTGCCCACC ACACCTATGC ACTCTGGCTA
GCCATTCCAA TGCTGCTACT TGGCTCTGCC ATCATACATC TAGTGCCAAA CTTGCTATCT
AACTCTCGCA TCACACAACT TGAACACTAT CGGGTACTAG CAGATAGAAC ATTAGCCGAC
AGTGAACTGT TTTTATCCAC TCCCACTCTA TTAGCAATCT GGACTCTTGG GTTCGCTTTC
ATGTTAATGA CCATTGCCGT TCATGCTGTC AGGCTAAAAC AGCTAATCAA CCATTGCTCT
GCGTTTACTA GCATAGAGAC TCATCTGACC GTTATTCAAC ATCAGAATAT TCACTCCCCT
ATGCTAGTGG GACTACGTAA ACCAAAAATC ATCGTTCCCT ATGGATTTGA ACAACTCAGT
ATCGCCCAAC AAACCGCCGT GATTGAACAT GAACTGTATC ACCATCGCCG AGGGGATATC
GGTATGAATC TTATCGCCTT CTCTCTGCTC AGTATTTTCT GGTTTAACCC TATCTGTTGG
CTCGCATACC GACGTTTTCG CGATGATCAA GAGTTAGCTT GTGATGCTCA AATAACCACA
TCTATGAATA CAGATGAAAA GATTGCCTAT AGCCGAGCCT TGCTCACATA CTCCCAGCAA
GCTCACATCG GCATGTTACA CACCCACTAT GGAAATAAAA ATATACTAAA AGAGAGGATA
TTACAGATGA AAAAACAACA TGAAAAAAGC ACACTCGCAA TTATTGGGCT TACACTAGGT
TTAGGCTTTA GCGGCTTAAT GCTGAATCAA CAAGTCCAAG CTGGTGATAA TCATGACTCT
ACTCATGCTG CAAAAAAACA GCAAATCTAT CCATTAACAC GTGTAGAACC TAAATACCCA
AAGGCCGCGA TTGAAGCAAA ACAAAATGGC TTTGTGCAGC TTGAGTTTGA TATCAAAAAA
TCTGGTGCTG TAGCAAATGT CTCTGTGATC AAATCCTCAC CTAAAGACGT ATTCGACAAG
CAGGCGGTTA AAGCGCTTAA GCAGTGGACC TACAAAAAGT CTAAGCAAGG TGCTAAAGGT
GTTCAGGTGC AGTTAGATTT TGTTATTGAT GAACCCGCAG CAGATGTTGA ACGTATAAAA
GTGACCGCAA AATAA
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| Protein sequence | MLNWLMEQTI LISLICAILL VGHKQILKLF GAHHTYALWL AIPMLLLGSA IIHLVPNLLS
NSRITQLEHY RVLADRTLAD SELFLSTPTL LAIWTLGFAF MLMTIAVHAV RLKQLINHCS
AFTSIETHLT VIQHQNIHSP MLVGLRKPKI IVPYGFEQLS IAQQTAVIEH ELYHHRRGDI
GMNLIAFSLL SIFWFNPICW LAYRRFRDDQ ELACDAQITT SMNTDEKIAY SRALLTYSQQ
AHIGMLHTHY GNKNILKERI LQMKKQHEKS TLAIIGLTLG LGFSGLMLNQ QVQAGDNHDS
THAAKKQQIY PLTRVEPKYP KAAIEAKQNG FVQLEFDIKK SGAVANVSVI KSSPKDVFDK
QAVKALKQWT YKKSKQGAKG VQVQLDFVID EPAADVERIK VTAK
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