Gene Swoo_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3729 
Symbol 
ID6118078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4543237 
End bp4544184 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content42% 
IMG OID641635293 
Producthypothetical protein 
Protein accessionYP_001762084 
Protein GI170728058 
COG category[S] Function unknown 
COG ID[COG3595] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATTA AACACCTTTC AAGATGCCTG TTACTCCCAC TTGTTTTAGT AAGCCAGTTT 
GCACTGGCAA GCGAATCTAT CGATAAACAG GTAAAGGTAG ACGAGGGGCT AAACCTCAAC
ATCAAAGTGT TAAGAGGCGA TGTAACAATA CAAAGCTGGG ATAAGCAAGA GGTCAGCATT
CAGGGCACTT TAGATGAACT CAGTGAGGGG TTTATCGTCG AACACCAAGG TAATGAGCTC
ACTCTTGAAG ATAAGATGCC AAGACAGTTT AATGGCAAAA ATAAAGAGGG ATCATTGCTC
ACCTTTAAGG TTCCTCGCTC ACTAAATCTA ACAGTAAGTG GACTCTCTGC CGACTATAAA
GTGACTCAAG TACAAGGAGG TATCTCTATC AACTCCATCA GCGGTAGCGT TCACCTTGAT
AGTTTAGATA AACAGGTATA TATAAAAACG GTTTCCGGAG ACATTAATGC CACAGCGCTC
AAGGGAGAGA TAAGTTTACA AACAGTATCT GGAGACATCA TAGATAAGCA AAGTAAAGGA
GAGGTTAGCT ACAAGCTTGT CAGCGGAGAG CTCACCGCTG ACTCCCTTGC TAAAGATGTC
ACAATTGAAC AAGTTTCTGG TGATACCAAC ATTAAATTAG CAAGCCTCAA CTCACTCGCA
GTAAGGACAA TTAGTGGGGA GGTTGAACTT ACGGCTGAAT CTATTTCAGA TAAAGCCACC
CTAAGTAGCG TCAGTGGTGA CTTAGAGTTA ACTTTAAATG GTGGCACTGA TGCTAGGTTT
AAGATAAATG GAGGTCCAGG TGGAAGAATC AATAACCAAC TAACTTCAGA TAAACCAAGC
AAGGAGAAGT ACTCCCCAAC CTCATACCTT AAGTTTTCAC TCGGCGATGC CCATGCCAAT
ATTGATATAT CAACGATCAG TGGTGAGATA ACGCTAAAAA AACATTAA
 
Protein sequence
MMIKHLSRCL LLPLVLVSQF ALASESIDKQ VKVDEGLNLN IKVLRGDVTI QSWDKQEVSI 
QGTLDELSEG FIVEHQGNEL TLEDKMPRQF NGKNKEGSLL TFKVPRSLNL TVSGLSADYK
VTQVQGGISI NSISGSVHLD SLDKQVYIKT VSGDINATAL KGEISLQTVS GDIIDKQSKG
EVSYKLVSGE LTADSLAKDV TIEQVSGDTN IKLASLNSLA VRTISGEVEL TAESISDKAT
LSSVSGDLEL TLNGGTDARF KINGGPGGRI NNQLTSDKPS KEKYSPTSYL KFSLGDAHAN
IDISTISGEI TLKKH