| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3727 |
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| Symbol | |
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| ID | 6118076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4542189 |
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| End bp | 4542725 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635291 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001762082 |
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| Protein GI | 170728056 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTGCAC AGTTAGCGTT TATCAAACCT TGTGAAACCT CAGAAAAAAA TCTGATTGAG
CAAGCTCAAC AAGGTAACAA GAAAGCATTT AAACAACTCT ATGATCTACA TCATAAGCGG
GTATATGCAC TTTGCTACAG ACTGTCAGGG CAACACTATT TAGCTGAAGA AGCAACTCAA
GAAACGTTTG TACGCTTATG GCAAAAGCTG CCTCAGTTTA GAGGCGACAG CCAGTTTTCA
ACTTGGTTGC ATAGCATGAC CGTTAACCAG GCGCTTAGCA GCATAAAAAA ACACAAGAGT
TTTTGGGCTA GATTCTCTCC AATCTATGAA CAAGTAGAGC TTGGAGGCGA TGAGATGGAG
TACCAAGCAC TGGACAAACA CCTGCTTAAA CTGCCTGAAC GAGCCAGGAT TGTTTTTGTG
CTATTTGCTG TTGAGGGTTA CCAGCATCAT GAAATAGCAC ACAAGCTCAA CATAGCTCAA
GGCACCAGCA AGGCTCAGTA TCACAGAGCA AGAAAATTAC TTCAGGAGAT GATCTGA
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| Protein sequence | MSAQLAFIKP CETSEKNLIE QAQQGNKKAF KQLYDLHHKR VYALCYRLSG QHYLAEEATQ
ETFVRLWQKL PQFRGDSQFS TWLHSMTVNQ ALSSIKKHKS FWARFSPIYE QVELGGDEME
YQALDKHLLK LPERARIVFV LFAVEGYQHH EIAHKLNIAQ GTSKAQYHRA RKLLQEMI
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