| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3726 |
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| Symbol | |
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| ID | 6118075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4541054 |
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| End bp | 4542010 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635290 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_001762081 |
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| Protein GI | 170728055 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTCA TCAATGCAGA AGAAGTACAT AACACACTTA ACTTTCCAGT GCTCATTAAC
GAGCTTAGAG ATACTTTCTC AAAGCCTGCT GGTATGCCCC AAAGACAAGT GTATTCACTA
GATGAAGCCA CTTCACACAA CGATGCCTTC GCCTTACTCC CCTCATGGAA TGAAAAAACC
ATTGCGGTAA AGGCTTTCAC CTATTTTCCT GAAAATCCAA GAAAAAATCA GCAACTAAAA
AGCCTACATT CAAAAATAAT GATCTTTGAC CGCAAAACCG GTGCTCCCCA AGCTTTAGTC
GATGGTACTA GTGTCACCTA TTGGCGCACA GCAGCGATTT CAGCATTAGG CAGTAGTTAT
TTATCCCGTA AGGACTCCAA AAAGTTACTC ATTTTTGGTA CAGGTAACCT CGCCTCATTT
ATGGCCCTCG CCCACGCCAG TGTACGCCCT ATCACTCAAA TTACGGTTTG GGGGCGAAAT
CAAGATAAGG CTCAGGCCAC TATTGAGAAG ATCCGTAATA AGCGGCCCGA CATTGAAGTT
ATCCTCAGCA AGAGCGTAGA GCACAGTGTC CGAGAAGCAG ATATCATTAG CTGTGCAACG
GGCTCTCCGA CCCCATTATT TGACAGTAAC TGGGTAGCAC CTGGCACCCA CACAGATTTT
GTCGGCAATC ATAATCACGA TAGACGTGAA TGTGATAGCA AGCTTGTATT GAGATCAGCT
GTATACGTTG ATTCTAAAAT TAATGTTTTT GCAGAAGCCG GAGAGTTACT GATCCCAGTA
TCAGAGGGAG AATATCAATT AGAGAGTGTA AAAGGAGAGC TTGCTCAACT CTGTAAAGAT
GAAATAAAGG GGCGAGAAGA TGAACAACAG ATAACCCTGT TCAAAACTGT GGGTACCGCT
CTAGCCGATC TTGTGGGCGC ACAACTGGTT TATTCACAGC TGAAACATCT CTTCTAA
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| Protein sequence | MIVINAEEVH NTLNFPVLIN ELRDTFSKPA GMPQRQVYSL DEATSHNDAF ALLPSWNEKT
IAVKAFTYFP ENPRKNQQLK SLHSKIMIFD RKTGAPQALV DGTSVTYWRT AAISALGSSY
LSRKDSKKLL IFGTGNLASF MALAHASVRP ITQITVWGRN QDKAQATIEK IRNKRPDIEV
ILSKSVEHSV READIISCAT GSPTPLFDSN WVAPGTHTDF VGNHNHDRRE CDSKLVLRSA
VYVDSKINVF AEAGELLIPV SEGEYQLESV KGELAQLCKD EIKGREDEQQ ITLFKTVGTA
LADLVGAQLV YSQLKHLF
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