| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3722 |
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| Symbol | |
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| ID | 6118070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4535089 |
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| End bp | 4536060 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635285 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001762077 |
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| Protein GI | 170728051 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.302376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTAG AGATTAATCT AAAAAGCGAG ATAACAGCAA CACAAACAGG CCAAAGATTA
GACCAAACTT TGGCTGAATT GTATCCTGAT TACTCCCGTA CACGCATCAA AGAGTGGATC
CAAGCAGGTT GGGTTTACAT TGATGGCGTT GTTTCAACAA AACCTAGAGA AAAAGTGCTT
GAAGGGCAAG AGATTGCCAT TGAAGCGACA CTCAAGGAAG AGACCGCAGC TAAAGCGCAA
GCGATAGATT TGGACATTGT TTATGAAGAT GACCACATTA TTGTTATCAA TAAGCAAGCT
GGGCTGGTTG TTCACCCTGG CGCCGGTAAC CAAGATGGAA CTTTGATGAA TGCTTTGCTT
CATCATTGTC CTGGAATAGA GCTGGTGCCT CGTGCGGGTA TTGTCCACCG TTTGGATAAA
GATACGACAG GTTTGATGGT TGTAGCTAAA ACTGTTGAAG CTCAGACTCA TCTGGTTTCT
GCGTTGCAGG CTCGTGAGAT CACTCGTGAA TATGAAGCGG TTGTTTTAGG TACGTTGATC
TCGGGTGGTA CTGTCGATGA GCCAATCGAT CGTCACCCAA CTAAACGTAC TCACATGGCA
GTAGTACACA ACGGCAAGCC TGCGATGACA CACTACCGAG TCGCTGAGAA ATTCAGAGCT
CATACTCGTT TAAGACTGCG TCTTGAGTCT GGCCGTACTC ACCAAATTCG TGTGCATATG
TCTCATATTG GGCATACCTT AGTTGGCGAT CCTGTTTATG GTGGTCGCCC TCGTCCTCCT
AAAGGTGTGA CGCCTGAGTT TTTTGAAACT TACATGGGCT TTAAGCGTCA AGCTCTGCAC
GCGATTAGAC TTGAGCTAGC GCACCCATAT ACCTTTGAGA TTATGAGCTG GCAGGCACCT
GTTCCTGAAG ATATGGTTAC CCTGACAAGA GCGTTAAGAA AAGACACTGA AGAAAACCCT
GTGGCTGTTT AA
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| Protein sequence | MTLEINLKSE ITATQTGQRL DQTLAELYPD YSRTRIKEWI QAGWVYIDGV VSTKPREKVL
EGQEIAIEAT LKEETAAKAQ AIDLDIVYED DHIIVINKQA GLVVHPGAGN QDGTLMNALL
HHCPGIELVP RAGIVHRLDK DTTGLMVVAK TVEAQTHLVS ALQAREITRE YEAVVLGTLI
SGGTVDEPID RHPTKRTHMA VVHNGKPAMT HYRVAEKFRA HTRLRLRLES GRTHQIRVHM
SHIGHTLVGD PVYGGRPRPP KGVTPEFFET YMGFKRQALH AIRLELAHPY TFEIMSWQAP
VPEDMVTLTR ALRKDTEENP VAV
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