| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3689 |
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| Symbol | |
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| ID | 6118023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4493374 |
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| End bp | 4494348 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635238 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_001762044 |
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| Protein GI | 170728018 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00564575 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.505374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCATA CGCCTGAGGT TGATACAGTG CCTGACATTA AACTTTTTGC TGGTAACGCA
ACACCTAGTC TCGCTAAGAA GATAGCCGAC CGTCTATTTT GTAAACTTGG AGACGCGGAT
GTTGGCGTTT TCAGTGATGG CGAAATCAGT GTCCAGATAA ACGAAAATGT ACGTGGTGCG
GATGTCTTCA TCATTCAATC TACTTGTGCA CCGACTAACG ATAACCTAAT GGAGCTTATC
GTTATGGTTG ACGCACTTCG TCGTGCTTCA GCTGGTCGTA TTACCGCTGT GATCCCTTAC
TTCGGTTACG CTCGTCAAGA CAGACGCGTA CGTAGTGCTC GTGTACCTAT TACCGCTAAG
GTTGTTGCTG ACTTCCTATC TAGTGTAGGT GTTGACCGAG TATTGACCTG TGATCTTCAC
GCCGAGCAGA TCCAAGGGTT CTTCGATGTT CCTGTTGATA ACGTATTCGG TAGCCCTGTG
CTGCTTGAAG ATATGTTAGA TAAGAAACTT GAAAACCCTG TCGTTGTGTC TCCAGATATT
GGCGGTGTTG TACGTGCTCG TGCAGTCGCT AAGCTACTTG ATGATTCAGA CTTAGCGATT
ATCGATAAGC GTCGTCCTCA AGCAAACGTT GCTCAGGTTA TGCATATCAT AGGTGATGTT
CAAGGTCGTG ATTGTATTAT CGTTGATGAC ATGATCGATA CTGGCGGAAC CCTATGTAAA
GCGGCAGAAG CATTGAAAGA GCATGGTGCT AACCGTGTAT TCGCTTACGC AACTCACCCA
GTATTCTCTG GCAATGCAGC GAAGAACATC GCTGAATCTG TTATTGATGA AGTGATTGTG
ACCGATACTA TTCCATTGAG CAAAGAGATC CAGGCACTGG ATAAGGTTAC TCAGTTGACC
ATGTCAACGC TGATGGCTGA AGCTATCCGC CGAGTAAGCA ACGAAGAGTC TATCTCTGCG
ATGTTTAAGC ACTAA
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| Protein sequence | MKHTPEVDTV PDIKLFAGNA TPSLAKKIAD RLFCKLGDAD VGVFSDGEIS VQINENVRGA
DVFIIQSTCA PTNDNLMELI VMVDALRRAS AGRITAVIPY FGYARQDRRV RSARVPITAK
VVADFLSSVG VDRVLTCDLH AEQIQGFFDV PVDNVFGSPV LLEDMLDKKL ENPVVVSPDI
GGVVRARAVA KLLDDSDLAI IDKRRPQANV AQVMHIIGDV QGRDCIIVDD MIDTGGTLCK
AAEALKEHGA NRVFAYATHP VFSGNAAKNI AESVIDEVIV TDTIPLSKEI QALDKVTQLT
MSTLMAEAIR RVSNEESISA MFKH
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