| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3688 |
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| Symbol | ipk |
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| ID | 6118022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4492476 |
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| End bp | 4493330 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635237 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001762043 |
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| Protein GI | 170728017 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.107172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.507176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAACC AACTATCTTT AGGCTGGCCC GCACCTGCAA AGTTAAACCT TTTCCTGCAC
GTTAACCATA GACGTGAGGA TGGTTATCAT GAACTTCAGA CACTTTTTCA ATTTATCAGT
CATGGTGATC TATTAGATTT TAAGGTCACC GATGACGGCT CACTGAAATT ACACTCAAAT
ATCGGTAACG TTGTCGCAGA TAGCGATAAC TTAATTCTGC GTGCCGCAAA ATTACTTCAA
GAGAGAACCG CAACAGAAAA AGGCGCTGAA ATTTGGCTCG ATAAACGCTT ACCTATGGGC
GGAGGAATAG GGGGAGGTTC ATCGGATGCA GCCACCTGTT TAATCGCACT AAATGCGCTA
TGGCAGACCC ATTTAAGTCG AGATGAATTG GCAGAATTAG GACTAGCTCT TGGTGCTGAT
GTTCCTGTTT TTATTAATGG TTTGTCTGCT TTTGCTGAAG GTGTGGGGGA AAAATTAATT
CAAGTTTCTC CCAAGGAGTA TTGGTACCTT GTTTTGGTTC CAGATGTGCA TGTTTCCACA
GCTGAAATAT TCCAAGATCC AGATCTACCA CGAAATACCC CCAAGTTAGA TCTAGACTCA
TTAATGAGCA GCCCATGGAG AAATGACTGC CAAGAACTTG TCGTAAAAAG ATACCCTCAA
GTTGCCAAAA CCTTAGACTG GCTGATAGAA TATGCGCCGT CCAGAATGAC GGGAACCGGG
GCTTGTGTTT TCGGAGAATT CGAACAGCAG CAGCAAGCAC AGGATGCCTT GGCTCAGTTG
CCAAGTAACA TGACAGGTTT TGTTGCTAAA GGGACAAACA TATCGCCTTT AGAGTTACGT
TTAGCGCAAC TTTAA
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| Protein sequence | MSNQLSLGWP APAKLNLFLH VNHRREDGYH ELQTLFQFIS HGDLLDFKVT DDGSLKLHSN
IGNVVADSDN LILRAAKLLQ ERTATEKGAE IWLDKRLPMG GGIGGGSSDA ATCLIALNAL
WQTHLSRDEL AELGLALGAD VPVFINGLSA FAEGVGEKLI QVSPKEYWYL VLVPDVHVST
AEIFQDPDLP RNTPKLDLDS LMSSPWRNDC QELVVKRYPQ VAKTLDWLIE YAPSRMTGTG
ACVFGEFEQQ QQAQDALAQL PSNMTGFVAK GTNISPLELR LAQL
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