| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3677 |
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| Symbol | |
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| ID | 6118011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4482355 |
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| End bp | 4482750 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641635228 |
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| Product | invasion gene expression up-regulator SirB |
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| Protein accession | YP_001762034 |
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| Protein GI | 170728008 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3094] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0538155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACTT TGAATAATCT GTACCCGGCG ATTAAGCACC TTCATTTAAC GCTTGTTGCG
GTAAGTGTGC TGTTTTTTAT CGTGCGTTTT GCACTACATC TTCGTGACTC TCCTATCATG
CAGAAGAAGC TAGTTAAAAT AGCTCCCCAT GTAATAGATA CTTTTCTACT TCTTTCAGGC
CTAACACTTT GCTTCATCAT CAAGCAGTAT CCGTTTGTGG ATCCTTGGCT GTCAGAAAAG
CTAGGTGCAG TTGTTGCTTA CATACTTTTA GCGACGATTG CGTTAAAAGC TAACCGCAAT
AAGTTGTTCA AAACCTTTGC GGCTTTAGGT GCAATTGCTT GGGTGGTTTA TGCTGCTAAG
CTTGCCATGT TTAAACAAGC TATGTTGTTA GGATAA
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| Protein sequence | METLNNLYPA IKHLHLTLVA VSVLFFIVRF ALHLRDSPIM QKKLVKIAPH VIDTFLLLSG
LTLCFIIKQY PFVDPWLSEK LGAVVAYILL ATIALKANRN KLFKTFAALG AIAWVVYAAK
LAMFKQAMLL G
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