Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3676 |
Symbol | |
ID | 6118010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4481567 |
End bp | 4482355 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641635227 |
Product | hypothetical protein |
Protein accession | YP_001762033 |
Protein GI | 170728007 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.113679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACTT TGCCTCTTAA AAATGAGATT GCACTGCCTG AAATGGCATT TGAGATCGGC GCTCATCTGA ACTTTTCAAA AGCTGAGTCA GCTAATTGGG CTTGGCTTGA GTTAGCAGGG TCTGTGCTTA GTCACTATGT GGTGGATAGG CACGAACGTC TTGCGGGGTT ACTGCGTTGG TTTTATCAAG ATTTAGGCTT TTGCATACGT CAGCCCTATT TTAGTGTTGA GGCTGCCGAT CTTGGAACCT GCATCAGCAG CCGTCAGGGA AATAGCACCA CGTTAGCCAC GGTATTGATG CTATTAGCCA AGCAGTTAGA TCTAAAGCTG GAACCTTTAT TACTTCCAGG AACAACGGTG CTGTCTAGTC GAATTGATGG TGTGGTTAAG TATATCGATC CTATGAACGG TAGCGAGTTA ACCCGTCATC AACTGCATGT GTTAGTTCGA GGTGAGCTAG GTAATGGTGT GCCATTTAAG GCAAGTTACC TTAAGCCAGT TAGTTTAAAG CGTTTGGTGT CACGTATGAT CCATGAGCTT AAAGCGGGCT GTATCGTCTC CCATAAGTTT GAACCAGCTC TGGAGTGCTG TAACTTGTTG TTGCAGTGGC ACCCAGACGA TCTCAATCTT AACCGTGAGC GTGCTTTTAT TGCTCAGCAG TTAGGTTGCA TCAATGTCGC TGCTGCCGAT CTCAAGCATT TCGTCGATAA CAGTCCTCAT GATCCTGTGA TTGAACTGGT GAAGATGCAA TTGAAAGAGC TAAGAGAGGA GCAGGAGATC TATCACTAG
|
Protein sequence | MTTLPLKNEI ALPEMAFEIG AHLNFSKAES ANWAWLELAG SVLSHYVVDR HERLAGLLRW FYQDLGFCIR QPYFSVEAAD LGTCISSRQG NSTTLATVLM LLAKQLDLKL EPLLLPGTTV LSSRIDGVVK YIDPMNGSEL TRHQLHVLVR GELGNGVPFK ASYLKPVSLK RLVSRMIHEL KAGCIVSHKF EPALECCNLL LQWHPDDLNL NRERAFIAQQ LGCINVAAAD LKHFVDNSPH DPVIELVKMQ LKELREEQEI YH
|
| |