Gene Swoo_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3650 
Symbol 
ID6117984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4443330 
End bp4444778 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content46% 
IMG OID641635201 
Productsulfatase 
Protein accessionYP_001762007 
Protein GI170727981 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3119] Arylsulfatase A and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00127194 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00847064 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGAAAC ACTATCCTCT TTTATTAGTA AGCCTTGTCA GCTTCTGTGC GTTTGCTGAC 
TCTAAACCTG AATTGCAACT TGAGAAGTCA TCTAATGGCG CTGATCAAAA CGTGCTTGTC
CTGCTGATAG ATGATCTTGG ATGGACAGAT TTGGGCGCCT ATGGCAGTCA ATATTACGAG
TCTCCAAACA TAGATGCTTT AGCATCACAG AGTCGGCTCT ATACTCAAGC TTACTCCTCA
TCCCCTGTTT GTTCTCCCTC TCGTGCAGCC TTAATGACGG GAAAACACCC CAGTAAACTC
AAAATTACGA CCCATTTTCC AGGTTATAAA GCTAAGTCTC CTAAGTTGAA GGAACCGTGG
AAAGCAGATC ACTTGGCATT AACTGAACTC ACCTTAGCCG AAGCCTTTAA ATCCCAAGGC
TACGAGACTT TTTTTGCGGG GAAGTGGCAT ATGGGAGGTG AGGGCTACCT ACCGACAGAT
CAAGGTTTTG ATATCAATAT TGGTGGCATG CATCGTGGCT CTCCACCTGG TGGGTATTAT
GATCCCTATA AAAACCCTAA TCTTCCGAAT CGTAACAAAG GTGAGCACCT GACTAAGCGG
CTGACCGATG AAACCATAGA CTTTTTATCT CAAAAGCATG AGAAACCTTT TTTTGCCCTC
TTGTCATATT ACGGGGTGCA TACTCCCCTG CAGGCGGGGC CTGATAAGTT GGCTTACTTT
AAGGAGAAAA CCAATACCGT GGCAGGTGAG AAAGCTTTTC TAATCGATAA GGGCCATCAA
AGCCGAACTC AGATAAATCA AGTCGATGCC AACTACGCCT CCATGATCTG GGCGGTAGAC
AAGTCTGTTG GCCGTATACT TGAGTCGCTT GAAAAGCAGG GGCTAGATAA GAACACTTTG
GTGGTACTAA CCTCTGATAA TGGTGGTTTC TCAACACGTC ATCAGGGGGA TGAAAGAGTA
ACATCGACTG CCAATCTACC ACTGCGCTCT GGTAAAGGTT GGGTCTATGA AGGGGGAGTG
CGTATTCCTC TGCTTATTCA TCAACCCGGT CAGCAAATTC AGAGTCAGCA CGATACCTTG
ACGACATCGG CTGATCTCTA TCCAACATTG GCTAATGTTG CTGGTGCTAA GATCCCAGAG
GGGATTGATG GCTCAGATAT CTTCTTATTG GATGAGGAGC CTGAACTTGC TAAGCAGCGA
GTCATAGTCT GGCATCATCC GCATTATCAT GGCAGCGGTA ACAAGCCAAG TGCCGCTATT
CGTGTGGGAG ATTGGAAACT ATTGCATTTT TACGAGCAAG ATAGGGTGGA GTTATACAAC
CTAAGCAATG ACATCGCTGA GCAGGTCAAT CTTGAGCAGT TAGAGCCTAA GCGACGAGCG
CATTTACTTG CACTACTGGA TGAGTGGTAT CGTGATAATG ATATCGAGCA AGTCAGCTTG
CTTGAGTAA
 
Protein sequence
MKKHYPLLLV SLVSFCAFAD SKPELQLEKS SNGADQNVLV LLIDDLGWTD LGAYGSQYYE 
SPNIDALASQ SRLYTQAYSS SPVCSPSRAA LMTGKHPSKL KITTHFPGYK AKSPKLKEPW
KADHLALTEL TLAEAFKSQG YETFFAGKWH MGGEGYLPTD QGFDINIGGM HRGSPPGGYY
DPYKNPNLPN RNKGEHLTKR LTDETIDFLS QKHEKPFFAL LSYYGVHTPL QAGPDKLAYF
KEKTNTVAGE KAFLIDKGHQ SRTQINQVDA NYASMIWAVD KSVGRILESL EKQGLDKNTL
VVLTSDNGGF STRHQGDERV TSTANLPLRS GKGWVYEGGV RIPLLIHQPG QQIQSQHDTL
TTSADLYPTL ANVAGAKIPE GIDGSDIFLL DEEPELAKQR VIVWHHPHYH GSGNKPSAAI
RVGDWKLLHF YEQDRVELYN LSNDIAEQVN LEQLEPKRRA HLLALLDEWY RDNDIEQVSL
LE