| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3649 |
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| Symbol | |
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| ID | 6117983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4441702 |
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| End bp | 4443198 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635200 |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_001762006 |
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| Protein GI | 170727980 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0144867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00339235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTAGAGT TTATGAAAAG AGAGCAATGG AACTCGCGAA TAGGCTTTAT TCTCGCCGCC
GTAGGCTCGG CAATTGGACT GGGGAATATT TGGCGCTTCC CCTATATGGC CTACGAGAAT
GGTGGCGGAG CCTTTTTTAT CCCCTACCTT TTCGCCATGC TTTCAGCCGG GATCCCATTT
ATGATAATGG AGTTCAGTCT AGGACATAAA CTCCGAGGCG CTTCACCTAA AATTTTCTCT
AAATTAGGTG AAAACTATGG GCTCAGGCTC GAATGGTTGG GCTGGTTTCA GGTCTTTATC
GCCGCCATTA TTGCTATCTA CTATGTAGCT GTTATCGGTT GGGCTATCTC CTTTTTCAGC
TTCTCATTTG ATCAAAGCTG GGGGGGCGAC ACCAACGCCT TCTTCTTTGG CGAATACCTT
AAAATTGGCG ACCACTCCCC CACCAGCCTA GGCGGTTTTC AACTGCATAT CGCCATCCCT
ATGGCCATTG CTTGGTCGAT CACCTTTATG GCCATATTTA CTGGTGTAAA AGGGGGCATT
GAGCGAGCCA GTAAGATAAT GATGCCACTG CTCTTTTTTA TGGTATTAAT ATTGATTGGA
CGAATCGTCT TTCTACCTGG CGCCCTAGAG GGACTTAACT ACCTGTTTCA ACCTGACTTT
AGTAAAATCA TGGATGCAAA AGTCTGGTCA GCAGCTTACG GGCAGATCTT CTTCACTTTA
AGTGTTGGCT TTGCCATCAT GTTGGCCTAT TCGAGCTACC TTCCTGAAAA GTCAGATATT
AATAACAACG CCTTTATGAC GGTGCTGATA AACTGCGGCT TCTCAATACT TGCAGGGGTA
CTCATCTTTG CCATCTTAGG TTATATGGCA CAGGAGCAGG CAAAGCCCCT AACCGAAGTG
GTCTCATCTG GGGTCGGTTT GGCTTTCGTC ACCATCCCCG CAGCAATTAA CTTACTTCCA
GCCCCCTACA TTTTTGGCCC ACTCTTCTTC TTTGCCTTAG TCGTTGCGGG GTTAAGTTCC
CACATATCGA TTATTGAAGC GGTCACCTCC GCCCTGATTG ATAAACTCTG TATGCCACGT
AAAAAGGCGG CCATCATAGT GTGTGGCAGC GGCTTTATTA TCTCCATGGC GTTTGCCACC
AATGGCGGAT TACTGCTACT GGATCTAGTT GATTACTTTA TTAATAATGT CGCCCTACTC
TTTAGCTGCT TTGCAGAGCT GATAATACTG GCTTGGCTGT TTAAGATTGC CGATGTTCGA
GAATACGCGA ATCGAATATC TGATTTCACC ATTGGCAGCT GGATGGATCT CTGTCTGCGC
TTTATCAGTC CCGCCATGTT AGCGATTATC TTAGTTAAAA ACCTGATCAA CACGGTCAAC
AACGGTTATG GTGATTACCC CATTACAGAT CAGCTGATAT TGGGCTGGGG ACTTATCGCC
TTTATGTTGT TTGTCTCCCT TATCATCAAT CTAGCATCCA ACAAGGAGGA GCTATGA
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| Protein sequence | MVEFMKREQW NSRIGFILAA VGSAIGLGNI WRFPYMAYEN GGGAFFIPYL FAMLSAGIPF
MIMEFSLGHK LRGASPKIFS KLGENYGLRL EWLGWFQVFI AAIIAIYYVA VIGWAISFFS
FSFDQSWGGD TNAFFFGEYL KIGDHSPTSL GGFQLHIAIP MAIAWSITFM AIFTGVKGGI
ERASKIMMPL LFFMVLILIG RIVFLPGALE GLNYLFQPDF SKIMDAKVWS AAYGQIFFTL
SVGFAIMLAY SSYLPEKSDI NNNAFMTVLI NCGFSILAGV LIFAILGYMA QEQAKPLTEV
VSSGVGLAFV TIPAAINLLP APYIFGPLFF FALVVAGLSS HISIIEAVTS ALIDKLCMPR
KKAAIIVCGS GFIISMAFAT NGGLLLLDLV DYFINNVALL FSCFAELIIL AWLFKIADVR
EYANRISDFT IGSWMDLCLR FISPAMLAII LVKNLINTVN NGYGDYPITD QLILGWGLIA
FMLFVSLIIN LASNKEEL
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