Gene Swoo_3641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3641 
Symbol 
ID6117975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4436135 
End bp4436701 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content44% 
IMG OID641635192 
Producthypothetical protein 
Protein accessionYP_001761998 
Protein GI170727972 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3056] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.689119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.360346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTC TTTTTCTATC ATTAATTGCG CTAGTTGTTC TATCGGGCTG TGCTTCTCAA 
ATGCCAAGCC ACATTGCACT CAACCCTCAA ATACCCGATA TCCAAACTCA ATCTCACTCC
TTGCAGCCTC TGGCACTGGA AACCATAGAT ACCCGTCCAG CCAACTTTAT CGTTCGATTC
AATAATGGCG ATGAGGCAGC TAAGCTAGTG AGCCCGTCTG AAGCGCCAAG AAGGCAGATG
GATGAGGTGT TTCGTGAGGG ATTAATCAAA GCTGGATATC AGGTTACTCC CAGCTCAATG
AAACAGGTAC AGTTTCAATT AGAGCAGCTA TTAACCGACG TTAACGACAC CACTTTTGGC
TATGAAGCTA ACAGCAATAT TGTGATCAAT GTGATTGCAA AAAATGATCG CGATACACTC
ACCAAACGCT ATACCGCCCG TAACACAGTA ACAGGGCCAT TTAGTGCAGA CTTTGCCACC
CTTGAGCTTG CCATTAATAA ACTGCTTGAT GAGCTAAGCA GTAAAATTTT AACCGATCCT
GAACTCAATA CTTTTATTCA GCAGTGA
 
Protein sequence
MKSLFLSLIA LVVLSGCASQ MPSHIALNPQ IPDIQTQSHS LQPLALETID TRPANFIVRF 
NNGDEAAKLV SPSEAPRRQM DEVFREGLIK AGYQVTPSSM KQVQFQLEQL LTDVNDTTFG
YEANSNIVIN VIAKNDRDTL TKRYTARNTV TGPFSADFAT LELAINKLLD ELSSKILTDP
ELNTFIQQ