| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3638 |
|---|
| Symbol | fre |
|---|
| ID | 6117972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 4433270 |
|---|
| End bp | 4433980 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641635189 |
|---|
| Product | FMN reductase |
|---|
| Protein accession | YP_001761995 |
|---|
| Protein GI | 170727969 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.970785 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.507176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATTG ATTGTAAGAT ATCAAAAATT GAATCGGCCA AAAACAATAT ATACAAGGTA
TATATTTCAC CTGAACAGAA TATTGATTTC AAAGCAGGTC AATACATTTT TATTAAATTA
AATGATAAAA AGACACCATT TTCTATTGCA AACTGTCCTA CAGAAAACAA AATTATTGAG
CTACATATTG GAAGTTCAAA TCAAGATAGC TCATCGACAT CGATAGAATA CTTTGTAGAT
GCATTAGTTA ACAACAGTAA GTTTGAGATC GATGCACCAC ATGGTGAGGC ATGGCTTCGA
ACTAACAATT ATAAACCTAT ATTATTAATT GCCGGTGGCA CTGGTTTATC CTATATCAAC
AGTATTCTTA AAAACTGCCT TAATCGAGGC TTTATCCAGC CTATCTATCT CTACTGGGGG
GTCAAAAATA TTGATTTCCT CTATGCTGAT GAAGAGCTCA CACAGTTATC AAACAAACAC
TGCAACTTAC ACTATATACC TGTCATTATC GAAGATGAGC AAGCGGTATG GCTTGGCAAG
AAAGGAACCG TGATTGATGC TGTTATGGAG GATTTCACAG ATTTAACTCC GTTTGATATT
TATGTTTGTG GACCATATCA GATGGCTAAG GCTGCAAAAG AGCGGTTAGT TTCAGAAAAA
AAAGCAAACT TTGAGCAGAT GTATGCCGAT GCCTTTGCTT ATATAAAGTA A
|
|---|
| Protein sequence | MIIDCKISKI ESAKNNIYKV YISPEQNIDF KAGQYIFIKL NDKKTPFSIA NCPTENKIIE
LHIGSSNQDS SSTSIEYFVD ALVNNSKFEI DAPHGEAWLR TNNYKPILLI AGGTGLSYIN
SILKNCLNRG FIQPIYLYWG VKNIDFLYAD EELTQLSNKH CNLHYIPVII EDEQAVWLGK
KGTVIDAVME DFTDLTPFDI YVCGPYQMAK AAKERLVSEK KANFEQMYAD AFAYIK
|
|---|
| |