| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3629 |
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| Symbol | |
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| ID | 6117963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4424263 |
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| End bp | 4425768 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641635182 |
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| Product | putative transcriptional regulator, CadC |
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| Protein accession | YP_001761988 |
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| Protein GI | 170727962 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.375084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAAGG TCTACTATGG AGATGGATTC TCTATATGTT GTAGTACACA TCAGATCCAA
TTTAATGATC GACAAGTTAC TGTACGCCCA AAAACCTTGG CATTAATCAT TGAGCTTATT
AAGCAGCAAG ACAATGTCGT GAATAAAGAG AGCTTACTGG CTAAGGTCTG GGACGATGTT
GTTTGTGATG AACAAGTTCT GTTTCAAACC ATCAGTGAGA TCCGTAAAAT ATTTGGGCCG
ATTCAGGTTA TTCAAACCTA TCCCCGCAAA GGCTATGCCT GGGTTGCTAC TGTTAACAGT
GTCCCTTGCA GTGAGACTGT AAGCCTCACA CCTTCACAAA TAACCCCAAG TGTTGATTTA
GGTTCTGAAA ACCCTCTGGG TCTACTACTT GGTTGGGGGA AGAGTAAGCA AGCTTTGCCT
CTCTACTTTT TTACCGTATC ACTTTTGCTC ATTTTTCTAT TTTTTCCCTC CAAACCTACG
ACTCCCAATG ATGGGACTGT GATTGTATTA CCTGTTGTTA ATAATGTGGC TGGTCAAGAT
CATCTTTGGG TGCCCCTAGG TGCCATGGAT CAGTTGATAG GGAAACTGAG CAGAGGAGCA
AAGGTGATGA GCACTGAATA TGTATTGCCA CTGGTATCAC AGATAAAGCG GACAAAGGCA
TACAGTGCAG ATGAACTAGC TAATGTTTTT AACACTACCG GTGCCAACTT GATTGTTGAG
AGTGAACTCT CTGGCTCTGT GCATGAGTAC AAGCTGAGTT ATAAACTGCA CTTTCAACAT
GATGTCAAAG TCGGGGTTCT GTTTAGTGAC AATGTGGATG AAGCCTTAAT ATCCTTAGCT
AAAACGGTAT TGGTGTACCA AGGTGGCAAG GTCGAGCAAC TCAGGGTTAA GTTTGAAAGT
GAGCTTAAAA ACGAGATGAT TCATCGCGCC ATAGCGTTAC AAAAAGAGAA GCAACTGGTA
GCAGCTAATC AGCTATTAAT CAGTGTGCTG GAGCTAGAGC CAGACAACAA TCGAGTGCGA
CTATTACTCG CTCAATGGTT TGTTGAGCAA GAGATGTTAA GCAGAGCTAG AGAGCTTCTT
GATGTTGCGA TAACCCAAGT AAGAGACAAG TCGCAAGCTA GGCTTGGCCG TCTCTATTAT
TGGCGAGCCA TCACTCTGTT TGATACAGCC GCTGACAAAG CCATGCTTGA GTTAGACAAG
TCGTTAACCT ATAGCCTTAA AGAGAGTGAT AGTTTGTATT TAGCTTATGC TTCATTGGCA
AAAGGGAAGC TTTACCAGCT GTCTGGCAAG ATGGAAAAGG CGGAAACCGC TTTTTTAAAT
ACCCTTAATT TTCACCGAGC TATTTTTTGC CCTATGGGGA TCAGCACTGC CAAATTAGTA
CTCGCTGAGT TCTACCGTGA AAATGGAAAT ATGGCGTTAT CTGATGAGTT TTTAATGGCG
GCGAGAGAGC AGATTGAGCT ACATCAATTA AAAATAGATC ACCCGCTAGT AAATTTTAAT
AATTAA
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| Protein sequence | MAKVYYGDGF SICCSTHQIQ FNDRQVTVRP KTLALIIELI KQQDNVVNKE SLLAKVWDDV
VCDEQVLFQT ISEIRKIFGP IQVIQTYPRK GYAWVATVNS VPCSETVSLT PSQITPSVDL
GSENPLGLLL GWGKSKQALP LYFFTVSLLL IFLFFPSKPT TPNDGTVIVL PVVNNVAGQD
HLWVPLGAMD QLIGKLSRGA KVMSTEYVLP LVSQIKRTKA YSADELANVF NTTGANLIVE
SELSGSVHEY KLSYKLHFQH DVKVGVLFSD NVDEALISLA KTVLVYQGGK VEQLRVKFES
ELKNEMIHRA IALQKEKQLV AANQLLISVL ELEPDNNRVR LLLAQWFVEQ EMLSRARELL
DVAITQVRDK SQARLGRLYY WRAITLFDTA ADKAMLELDK SLTYSLKESD SLYLAYASLA
KGKLYQLSGK MEKAETAFLN TLNFHRAIFC PMGISTAKLV LAEFYRENGN MALSDEFLMA
AREQIELHQL KIDHPLVNFN N
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