| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3619 |
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| Symbol | |
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| ID | 6117953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4414103 |
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| End bp | 4415197 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635172 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001761978 |
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| Protein GI | 170727952 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAA GAGTAACAGT GTGCTTTATC TCATTGGCAG TCTTGTTTAT ATCAGGGTGT
CAGGAGAAAG AGGTGCAAGT GGCACAAACA GGTGCTGTTG AGGTTGAAAC GATTGAGTGG
AAGTTGGTGA CCTCATGGCC AAAAAACTTC CCTGGCCTTG GAATGGCGCC AGAGCGATTC
GCTAAGTTGG TCGATGAGAT GTCTGCGGGT AGGCTCAAGA TTAAGGTATT TGGGGCTGGA
GAGTTGATGC CTGCGTTTGA GGTTTTTGAC GCAGTGAGTC AAGGTACAGT GCAGATGGGA
CACAGCGCTG CCTATTACTG GAAAGGAAAA ACGCCAGCGG CTCAGTTTTT TACCTCAATC
CCATTTGGTC TTAACGCACA GGAGATGAAT GGTTGGCTGC ATTATGGTGG CGGACTTGAA
TTGTGGGAGG AGGTTTACGA GCCCTTTGGC ATTCTTCCTC TTGCCGGCGG TAACACAGGT
GTACAGATGG GAGGTTGGTT TAATAAAGAG ATCAACTCCA TGGAAGATCT TAAAGGGTTA
AAGATGCGTT TGCCCGGTCT TGGAGGTGAG GTGCTAAAGC GTGTTGGTGG CGTACCTGTG
ACACTGCCGG GACGTGAACT CTATACGGCG CTGCAAACTG GCGCTATTGA TGCCACTGAG
TGGGTGGGCC CATTTAATGA TCTGGCTTTT GGCTTACATA AAGCGGCAAA GTTTTACTAC
TACCCTGGGT GGCATGAACC AGGCACAACC CTTGAGTTTC TGATGAACAA GGAAGCATTC
GCAGCTTTAC CAGCGGATCT TCAATCCATT GTTACTATTG CAGCGAGAGC AATTAATCAG
GATATGTTAG ATGAGTACAC CTCTAAACAT ATTATCGCGT TAGACTCACT GATAGATGAG
CACGGCGTTA TTCTTAAACA GTACCCTGAT GAGGTGATGA AGAAGCTGGC TGAGGTGTCT
AAAGTGGTTA TCAAGGAGCA GTCAGCTAAA GATGACACCA TGACTAAGGT CTATAAAGCC
TATATGGAGT ATGAAGCTGG TGTTCGCAAG TATCATAAAA TCTCTGAAGA TGCCTATAGC
CGTCTAAGAG AGTAA
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| Protein sequence | MIKRVTVCFI SLAVLFISGC QEKEVQVAQT GAVEVETIEW KLVTSWPKNF PGLGMAPERF
AKLVDEMSAG RLKIKVFGAG ELMPAFEVFD AVSQGTVQMG HSAAYYWKGK TPAAQFFTSI
PFGLNAQEMN GWLHYGGGLE LWEEVYEPFG ILPLAGGNTG VQMGGWFNKE INSMEDLKGL
KMRLPGLGGE VLKRVGGVPV TLPGRELYTA LQTGAIDATE WVGPFNDLAF GLHKAAKFYY
YPGWHEPGTT LEFLMNKEAF AALPADLQSI VTIAARAINQ DMLDEYTSKH IIALDSLIDE
HGVILKQYPD EVMKKLAEVS KVVIKEQSAK DDTMTKVYKA YMEYEAGVRK YHKISEDAYS
RLRE
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