Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3617 |
Symbol | |
ID | 6117951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4411607 |
End bp | 4413025 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641635170 |
Product | Na(+)-translocating NADH-quinone reductase subunit A |
Protein accession | YP_001761976 |
Protein GI | 170727950 |
COG category | [C] Energy production and conversion |
COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00607859 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATGGG CTTGGTATTT TCCCTGTCAT TTATTACAGG AACGCGGCGC ATTATCTTTC CTTCATAACG TAGTGCTTGT GGATATGATT ACAATAAAGA AAGGATTGGA CCTGCCCTTA GCTGGCGGGC CAGAGCAAGT CATACATAAT GGCCCAGCCA TTAAACGTGT AGCTACTTTG GGTGAAGAGT ATATTGGCTT ACGTCCCACA ATGAAGATTA AAGTGGGTGA TAAAGTTAAA AAAGGTCAGA TTATCTTCGA AGATAAGAAG AACCTTGGTG TTAAGTATAC GGCTTCAGCC AGTGGTACAG TAGTTGAAAT TAACCGGGGA GCACAGCGTG TTCTCCAGTC AGTCGTCATT GAAGCTGAAG GGAATGAGTG TGTCTCTTTT GCTAAATATG ATACTGCCCA GTTAGATACA TTGGACGCGC AACTTGTTCG TGACAACCTG ATTGAATCAG GGTTATGGAC TGCCATGCGT ACTCGTCCTT TCAGTAAAGC CCCTGCCGTA GATTCTACCG CAGCCGGTAT CTTCGTTACT GCCATAGATA CTCAGCCTCT TGCTGCTAAC CCTGAAGTGG TTATCGGTGA GCATAAAGAT GATTTTGCTA ACGGACTTAA GGTTCTTGCA AGATTGACTG AAGGTAAGGT TTATCTATGT AAAGCGCCTG GTGCTGATAT TCCAGCAGCC AATGCACAAG TAGAAGAGTT TGCTGGTGGA CATCCAGCAG GTCTGCCTGG CACTCACATT CACTTCCTAT TATCTGCATC TGCAAACAGA ACTGTTTGGC ATGTGGGTTA TCAAGATGTG ATTGCCATAG GTCAACTCTT TACTACCGGT GAGCTTAACT CTGAGCGTGT TGTTGCAGTG GTTGGCCCTA AAGCGTTAAA GCCAAGATTA ATTCGTACTC AAGTTGGTGC TTCAACGGCT GAATTAACAG CTGGTGAAAT TGCTGATGGT GAAGTGCGTG TGGTATCTGG TTCAGTGCTG AGTGGTCGTA CTGCCGTTGG GCCTCATGCT TATCTTGGTC GTTTCCATCA GCAAGTGTCG CTTCTAGAAG AGGGCAGAGA GCAGGAGTTT ATCGGTTGGG CTATGCCTGG CGCCGAAAAA TACTCTATTA CTCGCGCTTT CTTAGGTCAC TTGTCACCTT CTCGTCTGTT TAAGATGACG ACAAGCACTG GTGGTTCAGA CAGAGCTATG GTGCCTATTG GTAACTATGA GCGCGTTATG CCATTGGATA TTCTTCCAAC TATGTTGCTT AGAGATCTCG TCTCTGGTGA TTTTGATGGT GCCGCTTCAT TAGGTGCACT TGAGTTGGAT GAAGAAGATT TGGCGCTGTG TACTTTCGTA TGTCCTGGTA AGTATGACTA TGCTACTTAT CTGCGTGACT GTTTAGATAC GATCGTGAGG GAAGGCTAA
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Protein sequence | MRWAWYFPCH LLQERGALSF LHNVVLVDMI TIKKGLDLPL AGGPEQVIHN GPAIKRVATL GEEYIGLRPT MKIKVGDKVK KGQIIFEDKK NLGVKYTASA SGTVVEINRG AQRVLQSVVI EAEGNECVSF AKYDTAQLDT LDAQLVRDNL IESGLWTAMR TRPFSKAPAV DSTAAGIFVT AIDTQPLAAN PEVVIGEHKD DFANGLKVLA RLTEGKVYLC KAPGADIPAA NAQVEEFAGG HPAGLPGTHI HFLLSASANR TVWHVGYQDV IAIGQLFTTG ELNSERVVAV VGPKALKPRL IRTQVGASTA ELTAGEIADG EVRVVSGSVL SGRTAVGPHA YLGRFHQQVS LLEEGREQEF IGWAMPGAEK YSITRAFLGH LSPSRLFKMT TSTGGSDRAM VPIGNYERVM PLDILPTMLL RDLVSGDFDG AASLGALELD EEDLALCTFV CPGKYDYATY LRDCLDTIVR EG
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