| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3611 |
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| Symbol | |
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| ID | 6117945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4405934 |
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| End bp | 4406950 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635164 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001761970 |
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| Protein GI | 170727944 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.698198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA CCGCTGTAAA ATGGTTAGCT TTTATTGGGC TAGCCTTTTT TATTTCAGCT
TGTTCTAAAC CGGTTGAAAT TATCTCCCTC TCGGGTAATA CCATGGGAAC GACTTACCAC
ATTAAAGTCG TGCCTAATGC GCAGCTGCCA GAGCCCAATT TACTTCAAGC AGAGATTGAT
CTAGCACTTG AAAAAGTCAA CGATCAGATG TCTACATATC GCCCGAACTC AGAGCTTTCT
CGTTTTAATT CATCGGACTT TGAAGAGACA GTTACTGTAT CTGCCGATAC CGCAACTGTG
ATTAAAGAGG CGATTCACCT CTTTGAAGTG ACTGATGGTG CATTGGATAT CACCTTAGGC
CCATTGGTGA ACCTATGGGG CTTTGGTCCT GATAAACGTC CAACTCAGAT CCCAACAAGC
GAGATGATAG ACGAGGCTAA AGCAAGAACA GGTATTCAAT ACCTAAGTGT CGATGGTAAT
AAGTTAAGTA AGACTAAGAG CGATCTTTAT GTCGACTTGT CGTCCATTGC AAAAGGCTTT
GGTGTCGATA TTGTTGCTGC AATTTTGGAC AAGTACCATG TATCAGGTTA TTTGGTTGAG
GTTGGCGGCG AACTTAGCGT TTTTGGTCAT AAAATAGATG GTTCACCTTG GCGTGTTGCG
ATAGAACGCC CCGATATGGA TGATCGTGAG ATTCAGCAAG TCATAGCCCC TGGAGACATG
GCAATTGCAA CTTCGGGTGA TTACCGTAAC TATTACGAGG AAGATGGGCA TCAGTTTTCA
CATTTAATTG ATCCTCGTAC CGGTTATCCT ATCGATCATA GATTGGCCTC GGTAACTGTG
CTTCATAAGC AGTCGATGGT CGCAGATGGC TACGCGACTG CTATGATGGT TCTTGGTACA
GAAAAATCTC TTGAATTAGC TAAGCAGCAA AACTTAGCCA TTATGTTGAT TGAGAAGCAA
GATAACGGCT TTAAAATTTT CTATAGCGAT GGGTTTAAAC CTTTTGTGGG TGAATAG
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| Protein sequence | MQKTAVKWLA FIGLAFFISA CSKPVEIISL SGNTMGTTYH IKVVPNAQLP EPNLLQAEID
LALEKVNDQM STYRPNSELS RFNSSDFEET VTVSADTATV IKEAIHLFEV TDGALDITLG
PLVNLWGFGP DKRPTQIPTS EMIDEAKART GIQYLSVDGN KLSKTKSDLY VDLSSIAKGF
GVDIVAAILD KYHVSGYLVE VGGELSVFGH KIDGSPWRVA IERPDMDDRE IQQVIAPGDM
AIATSGDYRN YYEEDGHQFS HLIDPRTGYP IDHRLASVTV LHKQSMVADG YATAMMVLGT
EKSLELAKQQ NLAIMLIEKQ DNGFKIFYSD GFKPFVGE
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