Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3595 |
Symbol | |
ID | 6117929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4388117 |
End bp | 4388935 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641635148 |
Product | Beta-lactamase |
Protein accession | YP_001761954 |
Protein GI | 170727928 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTAAAC AGATCGATCT TTTTATCACA AAGTTCAAAG TAATCAGACT TTTTACACAT CTACTTCCCT GTTTATTCTT GCTTGGAGTC AGTTCAATAA CGGCTGCAGC TCCCAGCTCT TCACAAGTTA ACTGGTCTTC AGAACTGATA AAGATAACTC AAGTATATCC GACCCTGTAT TTAGTTAAGT CCTATAAAAC GATTAAGCTT TATCAAGACA AACCAGCACA GACCTTCGAT TCAAATTCAT TTATCTATGT CGATAACAGT GACGCGTATC TTATCGATAC CCCTTGGAGT GAGTCTGATA TGCCAGATCT GATGCGCTGG CTTGAGGTGA AGAAACTGCA GCTTAAGGGC ACGATTGTCA CTCACTATCA TCAAGATAGA GCGGGCGGCT TGGGTTATCT TGATAGATTA GGTTCTGCAA CCTATGCATC AAAGATGACC AATAAGTTAC TGGTTAACGA TAAGCAGCCA ACATCGAATC ACAGTTTTTC AGGAGACAAA TTCGCGCTAC TTAAGGGTAA AATTGAAGCC TTTTATCCGG GCTCTGGCCA CAGCATGGAC AATCTTGTTA TCTGGTTACC AGAGGAGAAA GTCATTGTTG GTGGCTGCTT ATTAAAAGAC AATAAAGTGA ACAACCTAGG CTGGACAGGC GATGCGGATC TTGCAAATTG GTATCACAGT ATCAGTAAGG TCAAAGCAGA GTTCCCCAAA GTTGAATTTA TCTTCCCTGG ACATGGAGAG GGCGCTAAAG GTCAATCGAT ATTGGATCAT TCTTTGTCTG TTACTAAGGA AGTTGCTCGT TTTGAATGA
|
Protein sequence | MSKQIDLFIT KFKVIRLFTH LLPCLFLLGV SSITAAAPSS SQVNWSSELI KITQVYPTLY LVKSYKTIKL YQDKPAQTFD SNSFIYVDNS DAYLIDTPWS ESDMPDLMRW LEVKKLQLKG TIVTHYHQDR AGGLGYLDRL GSATYASKMT NKLLVNDKQP TSNHSFSGDK FALLKGKIEA FYPGSGHSMD NLVIWLPEEK VIVGGCLLKD NKVNNLGWTG DADLANWYHS ISKVKAEFPK VEFIFPGHGE GAKGQSILDH SLSVTKEVAR FE
|
| |