Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3581 |
Symbol | |
ID | 6117915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4372949 |
End bp | 4373749 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635134 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001761940 |
Protein GI | 170727914 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000704965 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.319279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAC TACCAGTGTT ATTTCTTTCA ACTTTAGCCT TAACAGGCTG TGTCACTACG GAATCTCCTA CGGGACGAAA TCAGATTTTA CTTTTCTCCT CCCAAGAGAT AGATCAGATG GGTGCAAGCT CATTTGATCA GATAAAAAAG CAGGAGAAGG TGAGTCAAGA TCCTAAACTT AATGCTTATG TGGATTGTGT GGCAAACAGA ATAACAAGCG TACTGCCTAA ATCTAACCTT CCATGGGATG TGGTAGTGTT TGAGTCAGAT CAGGTGAATG CTTTTGCACT ACCTGGTGGT CATATCGGTG TCTATACCGG CCTATTAAAG GTCGCAGCAA ATGAAGACCA GTTGGCGACG GTGATTGGAC ATGAAGTAGC CCATGTATTG GCTAATCATA GTAATGAGCA GGTTTCTCGC GCCAAGTTGA CAGGTACGGG GATGCAACTG GCTGATGTTG CATTGGGTGC TGGTGGTGTG AGTAATAAAG ATCTTTATAT GGCAGCTCTA GGTTTAGGGA CTCAAGTGGG CTTTATTCTT CCCTATGGCC GCGAGCAGGA GAGTGAAGCT GATGTGATGG GCGTTGAGTT GATGGCAAGA GCGGGGTTTG ATCCGAGCCA GAGCATGGTG CTGTGGCAAA ATATGGCAAA ACAAGGTGGT GAACAGGGCC CAGAGTTACT TTCTACTCAC CCATCCCACG GTCATAGAAT CGATGAGTTG ACTCAAATGC AGTCTCAAGT CATGCCTCTT TATCAGGCAA GTAAAGGTCA AGTACAAAAT CGCTGTCAAA AGACGAAATA A
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Protein sequence | MKLLPVLFLS TLALTGCVTT ESPTGRNQIL LFSSQEIDQM GASSFDQIKK QEKVSQDPKL NAYVDCVANR ITSVLPKSNL PWDVVVFESD QVNAFALPGG HIGVYTGLLK VAANEDQLAT VIGHEVAHVL ANHSNEQVSR AKLTGTGMQL ADVALGAGGV SNKDLYMAAL GLGTQVGFIL PYGREQESEA DVMGVELMAR AGFDPSQSMV LWQNMAKQGG EQGPELLSTH PSHGHRIDEL TQMQSQVMPL YQASKGQVQN RCQKTK
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