Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3560 |
Symbol | rbfA |
ID | 6117892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4346082 |
End bp | 4346504 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635111 |
Product | ribosome-binding factor A |
Protein accession | YP_001761919 |
Protein GI | 170727893 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0858] Ribosome-binding factor A |
TIGRFAM ID | [TIGR00082] ribosome-binding factor A |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000743312 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCAAGAG AATTTAGTCG AACACGTCGT ATTGCACAGC AGTTACAGCA AGAGCTGGCT CAAGTGCTAC AGCGTGACAT TAAAGATCCT CGTATTGGCA TGGTAACGGT AAATGACGTT GAAGTATCAC GTGATTTAAG TTACGCCAAA GTCTTTGTTA CCTTCTTCGA AGAGGATAGC AAGCTTGTTG AGGAAAAATT AGAGGCGCTA ACAACAGCGT CTGGTTATGT TCGTTCACTG GTCGCTGGTC GCATGAAACT GCGCGTGATG CCTGAACTTA GATTTGTGTA TGATGCATCG CTTGTCGAAG GTATGCGCAT GTCTAACTTA GTGACTCGCA TCATTCATGA TGACGAAGCT AAGCAGCAGA AGCATAACGG TAAAGACAAA ACGGATACCG CTGATTCGGA AGGTGAAGAG TAA
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Protein sequence | MAREFSRTRR IAQQLQQELA QVLQRDIKDP RIGMVTVNDV EVSRDLSYAK VFVTFFEEDS KLVEEKLEAL TTASGYVRSL VAGRMKLRVM PELRFVYDAS LVEGMRMSNL VTRIIHDDEA KQQKHNGKDK TDTADSEGEE
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