| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3555 |
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| Symbol | |
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| ID | 6117887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4339201 |
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| End bp | 4340109 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635106 |
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| Product | lipoprotein NlpI |
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| Protein accession | YP_001761914 |
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| Protein GI | 170727888 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000743312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATTCAAA AAGTGCGGAC TGCCGCTGTA GTCGTATTGG CTGGTATGAG TATCTTACTT
ACAGGATGTA TATCGACTCA GTCCGGAGGG AGTGAACAAG GTAAGGTCAT GGTTGAACCT
GTCATGCCTG ATTACAAACT TGAGATCACC TTAGCAAAAT TAAATGAGAT CTTATCTTCA
GCTGAGCTCA CCGATGCGCA AAGGGCCAGA TTTCATTATG ATCGTGGCGT GATTTATGAC
AGTGTTGGAT TACGCATTCT AAGTCGTATC GATTTTCACC AAGCATTAAA GATGCAGCCA
AATCTTGCTG ATGCCTATAA CTTTATCGGT ATCTATTACA CTCAAGAAGG TGAGTTCGAA
AGTGCCTATG AGGCATTCGA TGCTGTGCTT GAGCTCTCAC CTGATTACGA TTACGCCTTT
TTAAATCGTG GCATTGCACT CTATTACGGT GAGCGTAATG AACTTGCTGC CTCGGATATG
GAGTCATTTT ATTCACTTGA CCCACAAGAT GGCTATCGAG CACTTTGGTT GTATGTGACT
GAAAGTGCCA ACAATCTCGA GCAAGCTAAG AGTAACCTAG CCGAGAATAG CCTGCGTCTT
AATCCAAATA CTTGGTCTAG CGTACTTGTT GATTTTTACC TAGGTAAGAA GAGTCGTGAT
GAGGTGTTTG CTGCTGCAAA GGAGGGACTT TCTCATCCCA ATGAATACGC TGAACGCCTT
TGTGAAGCAT ACTTTTATAT TGCCAAAATA GCTCAACAGA AGGGGCAAAA TATTGATGCA
GCAAACTACT TCAGACTGGC TCTGGCAACC AATATCTATG ATTTTGTAGA ACACAGGTAT
GCAAGGATTG AACTGGCAAA AATTAACGCC GTCATCTCTG CCGAGAAAAT GAGTGACTCT
TCTCGTTAA
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| Protein sequence | MIQKVRTAAV VVLAGMSILL TGCISTQSGG SEQGKVMVEP VMPDYKLEIT LAKLNEILSS
AELTDAQRAR FHYDRGVIYD SVGLRILSRI DFHQALKMQP NLADAYNFIG IYYTQEGEFE
SAYEAFDAVL ELSPDYDYAF LNRGIALYYG ERNELAASDM ESFYSLDPQD GYRALWLYVT
ESANNLEQAK SNLAENSLRL NPNTWSSVLV DFYLGKKSRD EVFAAAKEGL SHPNEYAERL
CEAYFYIAKI AQQKGQNIDA ANYFRLALAT NIYDFVEHRY ARIELAKINA VISAEKMSDS
SR
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