| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3551 |
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| Symbol | |
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| ID | 6117883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4334703 |
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| End bp | 4335962 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635102 |
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| Product | nucleoside transporter |
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| Protein accession | YP_001761910 |
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| Protein GI | 170727884 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000301741 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000473709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGATATTT TAATGAGTTT AGTAGGGGTG GTCACCTTAC TAGCGATAGC GTTCGCGCTA
TCTAATAATA AAAAAGCAAT TAATAAGCGT ACTGTATTTG GTGCTCTAGC AATTCAAGCT
GCATTTGGTG GTTTTGTTTT GTATGTACCA GTTGGTAAAG ATATCCTTAA GACAGTATCT
GATGGCGTAT CAAGCGTTAT TGGTTACGCT CAAAACGGTA TCGGCTTCCT GTTTGGCGAC
TTGGCTAACT TTAAAGTTGG TTTCATCTTC GCCGTCAATG TACTTCCAGT CATTGTTTTC
TTCTCTTCTC TTATTGCAGT CCTTTACTAC CTTGGCGTTA TGCAGTGGAT CATCCGTATT
ATCGGTGGCG CACTTCAAAA AGCACTAGGT ACGAGCCGTA CTGAGTCTAT GTCTGCTACT
GCGAACATCT TCGTTGGTCA AACTGAAGCA CCACTTGTGG TTCGTCCGTT TATCGCGACT
ATGACTAACT CTGAGCTATT TGCCATCATG GTAGGTGGTT TAGCGTCTAT TGCTGGTTCA
GTAATGGCTG GTTACGCGCA GATGGGTGTA CCTATCGAGT ATCTCGTTGC CGCTTCATTC
ATGGCAGCAC CAGGTGGTCT ATTAATGGCT AAACTGATGC ACCCAGAGAC TGAAGAAGCT
AAAAACGACA TGAGCGATCT TCCTGAAGAT CCTGACAAGC CAGCTAACGT ACTTGACGCT
GCCGCTGCTG GTGCTTCATC TGGTATGCAC TTAGCACTTA ACGTTGGTGC AATGTTACTA
GCTTTCGTTG GTCTTATCGC AATGCTTAAC GGCATTATCG GTGGTATCGG TGGCTTTATT
GGTATGGAAG GGCTAACGCT TGAGTTGATC CTTGGTTATA TTTTCATGCC TCTAGCATTC
CTTATCGGTG TACCTTGGAA CGAAGCACTT GTTGCAGGTT CTTTCATCGG TCAGAAGATT
GTTGTTAACG AATTCGTTGC TTACCTGAAC TTCGCTCCAT ACCTAAAAGA TGTGGCTGAC
GGTGGTGTTT TAGTTGAAGC AACTCAAGCT GTTATGACTG ATAGAACCAA AGCTATCATC
TCATTCGCTC TGTGTGGTTT CGCTAACCTA TCTTCAATCG CGATTCTACT TGGTGGTCTA
GGTGCTATGG CTCCTACACG TCGCCATGAC CTAGCTAAGC TTGGTATTCG CGCTGTGATT
GCAGGTTCTC TTGCAAACTT GATGAGTGCG ACGCTAGCAG GTCTATTCCT AGCGATTTAA
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| Protein sequence | MDILMSLVGV VTLLAIAFAL SNNKKAINKR TVFGALAIQA AFGGFVLYVP VGKDILKTVS
DGVSSVIGYA QNGIGFLFGD LANFKVGFIF AVNVLPVIVF FSSLIAVLYY LGVMQWIIRI
IGGALQKALG TSRTESMSAT ANIFVGQTEA PLVVRPFIAT MTNSELFAIM VGGLASIAGS
VMAGYAQMGV PIEYLVAASF MAAPGGLLMA KLMHPETEEA KNDMSDLPED PDKPANVLDA
AAAGASSGMH LALNVGAMLL AFVGLIAMLN GIIGGIGGFI GMEGLTLELI LGYIFMPLAF
LIGVPWNEAL VAGSFIGQKI VVNEFVAYLN FAPYLKDVAD GGVLVEATQA VMTDRTKAII
SFALCGFANL SSIAILLGGL GAMAPTRRHD LAKLGIRAVI AGSLANLMSA TLAGLFLAI
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