| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3546 |
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| Symbol | deoD |
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| ID | 6117878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4328683 |
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| End bp | 4329393 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635097 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_001761905 |
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| Protein GI | 170727879 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.799796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000820133 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTACAC CACATATTAA TGCAGCAGAC GGTGCTTTTG CTGAAACAGT ACTTTTCCCA
GGCGATCCGT TACGTGCTAA GTACATTGCT GAGACTTTCC TAGAGAACGT TGAGCAAGTG
ACTGATGTTC GTAACATGTT TGGTTACACT GGTACTTATA AAGGGACTCG TATCTCTGTT
ATGGGTTCAG GCATGGGTAT CCCTTCTGCA TCTATCTACG CGACAGAGCT CATCAAAGAC
TACGGTGTGA AGAACCTAAT CCGTGTTGGT ACTTGTGGCG CAGTAAGCAC TGACGTTAAA
GTTCGTGACG TACTTATCGG TATGGGTGCT TGTACTGATT CTCAAGTTAA CCGTCTACGT
TTCAAAGGCC AAGACTTCGC TGCTATCGCT GATTACAGCC TACTTAGCGC TGTAGTTAAA
GCTGCTGATG CTAAAGGTAC TAAGTACCGC GTTGGTAACG TTTTCTCAGC TGATCTTTTT
TACACTCCAG ATCCAGAGAT GTTTGATGTG ATGGAAAAGA TGAACATTCT AGGTGTTGAG
ATGGAAGCGG CTGGCCTTTA CGGTGTTGCT GCTGAGTTTG GCGCTAAAGC TTTGTGTGTT
GTGACTGTAT CTGATCACAT CCGTACTGGT GAGAAGACAT CTTCAGATGA GCGTCAAACT
ACGTTCAATG AGATGATCGA AATGACACTA GACGCAGCTA TCACACTTTA A
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| Protein sequence | MATPHINAAD GAFAETVLFP GDPLRAKYIA ETFLENVEQV TDVRNMFGYT GTYKGTRISV
MGSGMGIPSA SIYATELIKD YGVKNLIRVG TCGAVSTDVK VRDVLIGMGA CTDSQVNRLR
FKGQDFAAIA DYSLLSAVVK AADAKGTKYR VGNVFSADLF YTPDPEMFDV MEKMNILGVE
MEAAGLYGVA AEFGAKALCV VTVSDHIRTG EKTSSDERQT TFNEMIEMTL DAAITL
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