| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3534 |
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| Symbol | |
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| ID | 6117866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4315445 |
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| End bp | 4316176 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635085 |
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| Product | DNA-binding transcriptional regulator TorR |
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| Protein accession | YP_001761893 |
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| Protein GI | 170727867 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.176306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGTATA ACGTGTTGGT TGTCGACGAT GAGTCAGTCA TTCGTGCAAG GTTAAAAGGA
TATTTTGAGA AGGAGGGCTA TCGAGTCCAA CAGGCTCAAA ATGGCGAGCA GATGTGGCAT
GAGTTTAATC GTCAACATAT CGATCTTGTT ATACTCGATA TTAATCTACA AGGCAGTAAT
GGGTTAAATT CAGGTGCCGA TGGTTTAAGT CTGACAAGAG AGCTAAGAAG CCGTTCCGAT
GTAGGCATTA TACTGGTCAC AGGCCGTGAT GAGGCGATAG ATAAGATCAT TGGTTTGGAG
ATGGGAGCCG ATGATTATGT GACTAAGCCT TTTGAGTTAC GTGAGCTTTT AGTTAGGGTG
AAAAACCTGC TTTGGCGGAT CTCGCTTGTT CGTCAGGCTG AGCAGAAAGT TATTGAGCAG
CTTGAACAAA AAGATGATGT GATCGTGTTT GATGGTTATG CTCTGGAGCT TAATAGCCGT
AAGCTACTCC ACGGTGAAGA CCTCATTAAG CTGACAAAAG CTGAGTTTGA GTTATTGGCT
GCTTTTGCAC TGCACCCGCA ACAAGTGCTT TCCCGCGAGC GTCTTATGCA GCAAACAAGT
CATAGAAACC AAGATGTTAA TGATAGAACC ATCGATGTTA TCCTAAGACG GTTACGCAAT
AAGCTCAATC CAGATCTATT TGTGACGGTT CACGGGGAGG GATACCTATT TTCAGCTAAA
GTTGAAGACT AA
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| Protein sequence | MAYNVLVVDD ESVIRARLKG YFEKEGYRVQ QAQNGEQMWH EFNRQHIDLV ILDINLQGSN
GLNSGADGLS LTRELRSRSD VGIILVTGRD EAIDKIIGLE MGADDYVTKP FELRELLVRV
KNLLWRISLV RQAEQKVIEQ LEQKDDVIVF DGYALELNSR KLLHGEDLIK LTKAEFELLA
AFALHPQQVL SRERLMQQTS HRNQDVNDRT IDVILRRLRN KLNPDLFVTV HGEGYLFSAK
VED
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