| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3532 |
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| Symbol | |
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| ID | 6117864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4311253 |
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| End bp | 4314243 |
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| Gene Length | 2991 bp |
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| Protein Length | 996 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635083 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001761891 |
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| Protein GI | 170727865 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02956] TMAO reductase sytem sensor TorS |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.403445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCTT TATCACTTTC AAGAAAAAGT TTAGTCGGCC GCCTTATGTT GGCTTTTGGT
GTCCTTGGCT TACTGTTACT TCTTTTGGTT TCGTTGGGAA ATTTAAGCTT ATATTGGGTT
AATCAGGCCG ATGCTTACCT TTATGATAAA GCGCTCCCTG CATCTGAAGC AGCCAGAGAG
CTGGCGCAGG CATCAAACGC GCTGGCGGAA AATGCCCAAG CCCTAGGTCG AGTTGAAGAG
GAGCACCAAC GGCAATTTAT TGGCCGTAAA CTGTCGATAA ACAGCACCAA TATGCTCAGT
GCTATCGCTA AACTTAAAAC TTTGCAGGTG CAGAGTGATT GGCGTCTTGA GTTAACAGCG
GGTGAGATTA TTCATGACCT GTCACAACTG GGTAAACAGG TTGGCAACCG ATTATTAGTC
GCCAGTAAAC TCACGGCTCA GGGAGAGGCA TTAGCTCTGG CTGCAAGTCA TAGTATTGAG
CTGCTTGAGG CTGAGTTGGC AGTCGTTGAC TCTTCTGTGT TGGCTAAATT GAGTTTGGCC
TATCCAGAGA TAGTTGGTCA GATGAAGAGT GCGGAGTTAC TCGATACTGT AATTGAGCAT
GATATTGATA TTCAGGAGCG CTTGAATAGG GCGCTCAAGC TTATTCATGA TATCGCACTT
ATTGGCCAGT TACTTCAATC TCCTGAGCAG GAAAAGGGGC TATTAACTGT ATTGAGTAAC
ATGTCTCAGC AGCCCTCTGT TGTCCCCCCT AGCTCCTATC AACTTCAGCC CTTACAAGCC
TCAATGGATC CCAATGCCGC AGGCTTCCAA TCCTCCATAC AGGTTGACCT GATGGCCCTT
GAGTTACTTA AAGGCTTGGT GAGAGATCCT GTGCGTGCTA AAGAGCTAGA GAGCGAGTTT
TCAGTGTTAA GGCAGGTATC AGAGGGGCTG ACGACACAGA AAAACTATGT GCATCTGATA
AAAACACAGA GCAAGCAACT TATTATGCTA TCCAACAAAC TATATGAGCT TAATCAAACA
GTTGATCATG CTATGGCTAT GCAGCAGCAA GAGGCAGAAG GCGCTCGTTT GGATTATCTG
CAGCAGATAG CTTGGGCCAA AGCGGGGTTG ATGGGTACCG GCGTTCTCAT GTTTATTGTG
ATCTTGTTTG TGGTTTATCG TGTGATCTAC AAGGGGATCG CAGTGAGGCT CAACGAGGCG
ACCTATGCAC TCTCTAGGTT GAGTTTGGGA GATACTCAGG TTGGTATCAA CTCCCATGGT
GATGATGAGT TAACGGCAAT GGCGAGTGCT ATCGAGGCCT TTAAACAGAA AACGGCCCAT
AACCAAAAAC TTCAATTAGA ACTTAGAGAG AGCGCCGATG AGTTGAGCGA GCATAAGGCG
GCCCTTGAGA TCAAAGTTGA AGCCAGAACT GAGGAGCTGG CAATAGCCAA TAAACGCTTA
GACTCTGAAG CCAAAGGCCA TGCTCAGGCT CGAACTATGG CTGAACAGGC AAATCAAGCT
AAATCGCTCT TTTTAGCGAC CATGAGCCAT GAGATTAGAA CTCCTCTCAA TGGATTGTTA
GGTACGCTAA CGCTGCTGGG ACACTCAAAT CTTCCTGTTG CGCAAAAGCA GATGCTGGCT
CTATCTCAAT ACAGCGGAAC CCTGCTGCAG ACTGTGTTGA ACGATATTCT TGATTTCTCA
AGGTTGGAGC AGGGTAAACT TGCTAATGAA CCTCGTCCTG TGGCCATTAA CGATCTGCTT
GATGAGGTGG TGGCTATCAT GCTAGCAGGG GCTGGGCTGG CGGGATTAAA TCTGGTACTC
GATAGTGGCA AACTGCCAGA GTGGATCAAT ATTGATGGCC CTAAATTAAG ACAGGTGCTG
TTTAACCTGA TTGGCAACGG CATTAAATTT ACTCCTGAAG GGGAGGTGAG ACTTAAGGTA
TGGGTGGAGG ATAGAGCACT CTGCTTCATG GTTATTGACA GTGGTGTTGG GATCACCGAT
GACGCTAAGA AACATCTGTT TAAGGCTTAC AGTGCGCAAT TGAATCAGGG ACGCTCTCGT
GGCACAGGTT TAGGACTTGC TATCAGTAAG GAGCTGGTGG AGTTGATGTG TCAGTTGCCT
GAATATGAAG CAGAATCAAT TGCGGGAGAG CTGTTTGAGG AAGGTTGTAA ACCGCTTTGG
GTTGAAAGCG AGGCGGGAGT TGGCAGTCGT TTTGGGTTTA GTTTGCCGCT GGTTATTTGT
GAGCAGGCTC ATGAAGGGGG ACAAGAACCT CAGAGAATTA CAAATAAGAA ACGGGTTCTG
GTGATAGAGG ATAATAAAGT TAATGCGATG GTCGCTCAGG GATTTCTGGC TCATTTAGGC
CATGAGTCAG TGCTTGCTGA TAGCTGCGCA GAGGCAAGAA ATATTTATTG CACACAGAGT
GCGAATAGCT TCGATGCCAT CATGTTAGAT ATCCAATTAG GAGATGGTTC TGGTTTGGCG
CTTTTAAAAG AGCTAAGAGA GGTGACTTTA CACGCTTCTC ACCAACTGGA TATCGCCGCA
TTTACTGCCC AGATCCAAGC CGATGACATG GATCATTATC GTGAGATAGG CTTTGATCTT
GTTCTTGGGA AACCGCTTAA TATGCAGATG CTAGCGGCAT GGATTGGCGT GGTTAATCCG
CTCGAAGAGG AAAGAGTGGC AAATACCTCT CCTGATGATA AGCAAGGGGA GTTGTTGGAT
ATCGGACAGA TAGAGCAAGA TATCGAGTAT TTGGGTAGGG ATGCTGTAGA TGAGATGCTG
ATGCTATATA AAGAGTCGAG CCAAGTTCAA CTCTCGGCTC TGTTACAAAA GAGCGAGAAT
CGAAATACCT TGCTGCATGC ATTAAAGGGA AGCAGTGCCA GCATGGGATT TATCGCATTA
TCTAAGCTGT GTAAGTTACT GGAAACATCT GAATATAAAG ATGGTGAGTA TCAAGGCTTG
CAGCAACTAC ATAAAGACTC TCTGGCTGCA TTTAGTCAGC TACTTGGCTA G
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| Protein sequence | MSALSLSRKS LVGRLMLAFG VLGLLLLLLV SLGNLSLYWV NQADAYLYDK ALPASEAARE
LAQASNALAE NAQALGRVEE EHQRQFIGRK LSINSTNMLS AIAKLKTLQV QSDWRLELTA
GEIIHDLSQL GKQVGNRLLV ASKLTAQGEA LALAASHSIE LLEAELAVVD SSVLAKLSLA
YPEIVGQMKS AELLDTVIEH DIDIQERLNR ALKLIHDIAL IGQLLQSPEQ EKGLLTVLSN
MSQQPSVVPP SSYQLQPLQA SMDPNAAGFQ SSIQVDLMAL ELLKGLVRDP VRAKELESEF
SVLRQVSEGL TTQKNYVHLI KTQSKQLIML SNKLYELNQT VDHAMAMQQQ EAEGARLDYL
QQIAWAKAGL MGTGVLMFIV ILFVVYRVIY KGIAVRLNEA TYALSRLSLG DTQVGINSHG
DDELTAMASA IEAFKQKTAH NQKLQLELRE SADELSEHKA ALEIKVEART EELAIANKRL
DSEAKGHAQA RTMAEQANQA KSLFLATMSH EIRTPLNGLL GTLTLLGHSN LPVAQKQMLA
LSQYSGTLLQ TVLNDILDFS RLEQGKLANE PRPVAINDLL DEVVAIMLAG AGLAGLNLVL
DSGKLPEWIN IDGPKLRQVL FNLIGNGIKF TPEGEVRLKV WVEDRALCFM VIDSGVGITD
DAKKHLFKAY SAQLNQGRSR GTGLGLAISK ELVELMCQLP EYEAESIAGE LFEEGCKPLW
VESEAGVGSR FGFSLPLVIC EQAHEGGQEP QRITNKKRVL VIEDNKVNAM VAQGFLAHLG
HESVLADSCA EARNIYCTQS ANSFDAIMLD IQLGDGSGLA LLKELREVTL HASHQLDIAA
FTAQIQADDM DHYREIGFDL VLGKPLNMQM LAAWIGVVNP LEEERVANTS PDDKQGELLD
IGQIEQDIEY LGRDAVDEML MLYKESSQVQ LSALLQKSEN RNTLLHALKG SSASMGFIAL
SKLCKLLETS EYKDGEYQGL QQLHKDSLAA FSQLLG
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