| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3529 |
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| Symbol | |
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| ID | 6117861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4307797 |
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| End bp | 4309038 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635080 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001761888 |
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| Protein GI | 170727862 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0134965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCT CTTCAATGGC GTTAAGTGCC GAGTTACTTA ATGTCTTATC TGAGCTTAAC
TATAGTGAAC CAACACAGGT ACAGGCTGAG GCTATTCCTG CTATTTTAGC AGGGAGTGAT
CTCATGGCGG GGGCACAGAC TGGTACTGGG AAAACAGCCG CATTTGCGCT GCCTATCCTT
GAACGATTGA GTCAGCTAAA GTCCAGTCAA ACTTCATATG AACTTACCCC TGTTCGTGCG
CTTATTTTAA CGCCGACTCG AGAGTTAGCG CTCCAAGTTC ATCAAAGTTT TGTTCGCTAC
GGTGATGGTT TAACACTTAA GAGTGCAATC GTGTATGGCG GTGTGAGTAT CGATGCCCAG
GCTGATATCT TAAAGGCTGG TGTTGATATC TTGATCGCAA CACCGGGGCG TCTGCTCGAT
CATTTAAGAC GGGGATCACT CACTTTAACG CAGTTAGCAT TTCTAGTATT TGATGAAGCG
GATCGTATGT TGGATATGGG CTTTAAAGAT GAGATAGATG CCATACTTAA GCAGCTACCT
AAAGAGAGAC AAACCTTGCT GTTTTCGGCG ACCTTCGATG ATGGGGTATT TAACTTAAGT
AAGCGGTTAC TTAAAGATCC TAAATTGATT GAAGTGGGTA AGCGAAATGC CGCAGCGGGA
AAAGTTGAAC AACGTGTTTA TGCCGTTGAT GCTGATAGAA AAAGTGAGCT GCTATGTCAT
CTAATCCTCT CAAAAAAATG GCGGCAAGTG TTGATCTTTA GCCGGAAAAA ACAGGGCGCC
GATAAGCTGG CGGCAAAGCT TGTGAATGAA GGCGTGAAGG CGCTGGCGTT TCATGGCGAT
CTTTCCCAAA GCGTGCGTGA GAAAGTGCTG CAAGAGTTTA AAAGTGGAGA GCTGCAAGTG
TTGGTGGCTA CCGATGTTGC AGCCAGAGGC TTAGATGTTG AGTCGTTAGA GGTGGTGGTG
AACTATGAGC TTCCTTTTGT TGCCGAAGAT TATGTCCACC GTATTGGGCG TACAGGTCGA
GCAGGGAACT CAGGTTTGGC TATCACACTA TATTGTGAAG ATGATGCCTT GTTGCTTGAA
GAGGTTGAAG CTGTGTTAGA TACGCGTTTG CCTCAGCAAT GGCTGGAAGG GTTTGAACCA
GATCTAACGA AAAGTGTTAG CGTGACAAGA AAGAATAGTA AGTCGGCTCA GAAGCAGCGT
GCTAGACGCA GAGCGACTGG AAGTAAGAGA TCAAGACGTT AA
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| Protein sequence | MSFSSMALSA ELLNVLSELN YSEPTQVQAE AIPAILAGSD LMAGAQTGTG KTAAFALPIL
ERLSQLKSSQ TSYELTPVRA LILTPTRELA LQVHQSFVRY GDGLTLKSAI VYGGVSIDAQ
ADILKAGVDI LIATPGRLLD HLRRGSLTLT QLAFLVFDEA DRMLDMGFKD EIDAILKQLP
KERQTLLFSA TFDDGVFNLS KRLLKDPKLI EVGKRNAAAG KVEQRVYAVD ADRKSELLCH
LILSKKWRQV LIFSRKKQGA DKLAAKLVNE GVKALAFHGD LSQSVREKVL QEFKSGELQV
LVATDVAARG LDVESLEVVV NYELPFVAED YVHRIGRTGR AGNSGLAITL YCEDDALLLE
EVEAVLDTRL PQQWLEGFEP DLTKSVSVTR KNSKSAQKQR ARRRATGSKR SRR
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