| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3528 |
|---|
| Symbol | |
|---|
| ID | 6117860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4306370 |
|---|
| End bp | 4307737 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641635079 |
|---|
| Product | MgtE intracellular region |
|---|
| Protein accession | YP_001761887 |
|---|
| Protein GI | 170727861 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
|---|
| TIGRFAM ID | [TIGR00400] Mg2+ transporter (mgtE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000114236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGAAT TGAATAATGA AAATGACGCT ACTCAGTTAG ATATCGCTGA TGTGGTTCAG
CTATTGACTG AGGCGGAGGG TCAGGCGCAG TCAGAGGTGT TTGATGAGAT CCTTGAGGGA
GCTGAGTCAG GAACGGTTGC ACTTTTATTA GAGTCGCTAC CCTTAGATGA GCGTTACGAT
AGGTGGCAGC AGGTTGATGA TAATGAGCGG GTGACCGTTC TGAGTTTAAT GCGCGCCGAA
CCTAGACTAG GGATATTAGA GCAGATGTCC TTAGAGGAGA GCGATCTCCT ATTTGCTCAG
TTAAGTCCTG AAGATTTGAT TGATTGGAGT GATCACCTTC CCGACAGCTT GACAGAGAGA
GCGTTGGCGA AGATGGGATT ACGTCAGCGA AAACACTTCG AACTCTATGA TCAATATTCT
GACAATGAGA TTGGCCGCTA TGCCGATCAT CAGATGTTGG TATTGGATCT TAAATCCTCT
ATCGGGCAAG CACAGAACTT TTTTCGACGG ATCAACTTAG ACTGTAACGA TAAGATTTTT
CTTGTTGATG AAAATGATAA GTATCAAGGT GATGTTAGAC GCTTTGATAT CTTTAAACAT
GATCCAAGTG AGCCGCTGGC GTCACTACTG TCTGAAGATA ACCGAGCGCT TGCAGCAGAT
ACCTCTCTGC TAGAAGCTGC GGAGTCGATG GAACACAGCC GTGAAGTTGA GATGCCCATT
GTTGATGATG AAGGTGTCTT GATTGGGCGA GTGACCTTGA GAACGGCAAC CATCTTAGTC
AGAGAGCATT ATGAAGCCCA GTTGATGGCC ACGGCGGGTA TGGATGAGTC TGATGACCTG
TTTGCACCAA TTGTTAAAGG GGCTCAGCGC CGAGCTATCT GGTTAGGGAT AAACTTACTG
ACCGCTTTTC TGGCTTCTGC GACCATAGGA TTATTTGAAG ATGTGCTAAC CCAAGTGGTT
GCTCTTGCCA TCTTAATGCC TATTGTGGCC TCGATGGGCG GGATTGCGGG TAGTCAATCG
TTAACCTTGA TGATCCGCGG CATGGCGATG GGACAAGTTT CACCTGGTAA CCGACTCTCG
CTGCTGAAAA ATGAGTTAGG GATAGGCAGC GTTAATGGGA TTTTATGGGC GGGCATTATT
GGTGCTGTTG CCGCTTGGTG GTTTGGTGAT AACACCATCG GCATGGTGAT GGCGTGCGCC
ATTTTAGTTA ATATGCTGGT GGCGGCAATA GCGGGAGTTT TAGTACCGAT TATTTTGCAA
AAATGCAATC AAGATGCGGC TCTATCAGGC TCCGTCATCT TGACCACGGT GACCGACGTG
GTTGGTTTCT TCACTTTCTT AGGCGTGGCT AGCATACTGT ATTTATAG
|
|---|
| Protein sequence | MVELNNENDA TQLDIADVVQ LLTEAEGQAQ SEVFDEILEG AESGTVALLL ESLPLDERYD
RWQQVDDNER VTVLSLMRAE PRLGILEQMS LEESDLLFAQ LSPEDLIDWS DHLPDSLTER
ALAKMGLRQR KHFELYDQYS DNEIGRYADH QMLVLDLKSS IGQAQNFFRR INLDCNDKIF
LVDENDKYQG DVRRFDIFKH DPSEPLASLL SEDNRALAAD TSLLEAAESM EHSREVEMPI
VDDEGVLIGR VTLRTATILV REHYEAQLMA TAGMDESDDL FAPIVKGAQR RAIWLGINLL
TAFLASATIG LFEDVLTQVV ALAILMPIVA SMGGIAGSQS LTLMIRGMAM GQVSPGNRLS
LLKNELGIGS VNGILWAGII GAVAAWWFGD NTIGMVMACA ILVNMLVAAI AGVLVPIILQ
KCNQDAALSG SVILTTVTDV VGFFTFLGVA SILYL
|
|---|
| |